Nocardia otitidiscaviarum: FOH10_31505
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Entry
FOH10_31505 CDS
T06114
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nod03032
]
FOH10_31505 (gyrB)
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_31505 (gyrB)
Enzymes [BR:
nod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FOH10_31505 (gyrB)
DNA replication proteins [BR:
nod03032
]
Prokaryotic type
DNA Topoisomerases
FOH10_31505 (gyrB)
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOH10_31505 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QDP82578
UniProt:
A0A378YDU9
LinkDB
All DBs
Position
complement(7002870..7004918)
Genome browser
AA seq
682 aa
AA seq
DB search
MAANDSNASGSTPGKAGNQDYGASNITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVD
NSVDEAMAGYASRVDVTLLADGGVRVVDDGRGIPVEMHAQGIPTVEVVMTQLHAGGKFDS
DAYAVSGGLHGVGISVVNALSTRMHVEIDRDGYHWSQEYKDSKPGKLIKGDPTKRTGTTQ
TFWADPNIFETTVYNFETVARRLQEMAFLNKGLTITLTDERVSEGEITDEVVSETAEAPK
HLDENTPPAEPKVKTRTYHYPGGLEDYVKHINRTKTPIHNSIVSFTGKGTGHELEVAMQW
NSGYSESVHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDGNLTGDDIREG
LAAIVSVKVADPQFEGQTKTKLGNTEVKSFVQRTCNEHLTHWFEANPADAKTIVQKAVSS
AQARVAARKARELVRRKSATDLGGLPGKLADCRSKDPSKSEIYIVEGDSAGGSAKSGRDS
MYQAILPLRGKIINVEKSRIDKVLKNNEVQSIITAFGTGIHDEFDISKLRYHKIVLMADA
DVDGQHISTLLLTLLFRFMRPLVEHGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLER
GLAAGKKINKDDGVQRYKGLGEMNPKELWETTMDPSVRVLRLVTLDDAAAADELFSVLMG
EDVEARRSFITRNAKDVRFLDV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccaacgactccaacgcaagcggctccaccccgggcaaagcgggaaaccaggac
tacggtgcctccaacatcacggtcctggagggcctcgaagccgtccgcaagcgtcccggc
atgtacatcggctccaccggtgagcgcggtctgcaccacctgatctgggaggtcgtggac
aactccgtcgacgaggcgatggccggatacgcctcccgcgtcgatgtgaccctgttggcc
gacggcggcgtccgagtcgtcgacgacggccgcggtatcccggtggagatgcacgcccag
ggcattccgaccgtcgaggtcgtcatgacccagctgcacgcgggcggcaagttcgactcc
gacgcctacgcggtgtccggcggcctgcacggcgtcggcatctcggtggtgaacgcgctg
tccacccgcatgcacgtggagatcgaccgcgacggctaccactggagccaggagtacaag
gactccaagccgggcaagctcatcaagggcgaccccaccaagcgcaccggcaccacccag
accttctgggcggatccgaacatcttcgagaccaccgtctacaacttcgagacggtcgcg
cgccgcctgcaggagatggcgttcctgaacaagggcctcaccatcaccctgaccgacgag
cgggtctccgagggcgagatcaccgacgaggtggtgagcgagaccgccgaggcgcccaag
catctcgacgagaacacgccgcccgccgagccgaaggtgaagacccggacctaccactac
ccgggcggtctcgaggactacgtcaagcacatcaaccggaccaagacgccgatccacaac
tcgatcgtgtcgttcaccggcaagggcaccgggcacgagctcgaggtggccatgcagtgg
aactccggttactccgagtcggtgcacaccttcgccaacaccatcaacacccatgagggc
ggcacccacgaggagggtttccgcgctgcgctcaccacggtggtgaacaagtacgcgaag
gacaagaagctcctcaaggagaaggacggcaacctcaccggcgacgacatccgcgagggt
ctggccgccatcgtgagcgtgaaggtcgccgacccgcagttcgagggccagaccaagacc
aagctcggcaataccgaggtcaagtcgttcgtgcagcgcacctgcaacgagcatctgacg
cactggttcgaggccaatccggccgatgccaagaccatcgtgcagaaggcggtgtcctcg
gcgcaggcgcgcgtggccgcgcgcaaggcgcgtgagctggtgcggcgcaagagcgcgacc
gatctgggcggactgcccggcaagctggcggactgccgctccaaggatccgagcaagtcc
gagatctacatcgtggagggcgactccgccggtggctcggccaaatccggtcgcgactcc
atgtaccaggcgatcctgccgctgcgcggcaagatcatcaatgtcgagaagtcgcgcatc
gacaaggtgctcaagaacaacgaggtccagtcgatcatcacggccttcggcaccggcatc
cacgacgagttcgatatcagcaagctgcgctaccacaagatcgtgctgatggccgacgcc
gacgtggacggtcagcacatctcgaccctgctgctgaccctgctgttccgcttcatgcgg
ccgctggtcgagcacgggcacgtcttcctggcgcagccgccgctgtacaagctcaagtgg
cagcggtcggatccggagttcgcctactccgaccgggagcgcgacggtctgctggagcgc
ggcctggcggcgggcaagaagatcaacaaggacgacggcgtgcagcgctacaagggtctc
ggcgagatgaacccgaaggagctgtgggagaccaccatggatccgagcgtgcgggtgctg
cgcctggtcaccctggacgacgcggcggccgccgacgagctgttctcggtgctcatgggt
gaggacgtcgaggcgcggcgcagcttcatcacccgcaatgccaaggacgtccgcttcctc
gacgtgtag
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