Nostoc sp. CENA543: CLI64_06440
Help
Entry
CLI64_06440 CDS
T05285
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
noe
Nostoc sp. CENA543
Brite
KEGG Orthology (KO) [BR:
noe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noe03021
]
CLI64_06440
Transcription machinery [BR:
noe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLI64_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
CM_1
Motif
Other DBs
NCBI-ProteinID:
AUT00046
UniProt:
A0A2I8A3V7
LinkDB
All DBs
Position
complement(1539954..1540937)
Genome browser
AA seq
327 aa
AA seq
DB search
MPTVNTHNEDLNAKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMSLLDAKDALAK
KLEREPSLPEWADHVRKSETDVKQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPSPAEIAKELELEPAQIREYLNMARQPVSLDVRVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNTLLAELTPQQREVLALRFGLEDGNEMSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacacccacaacgaagacctgaacgccaaattcacggctgatatggtg
cgaacctatctgcgagaaattggcagagttcccttgcttacccgtgagcaggagattgtt
tacgggaagcaggtgcaacaaatgatgtcacttctagatgctaaagatgctttagcgaag
aagttagagcgcgaacctagtttaccagagtgggcagatcatgtccgcaagtcggaaacc
gacgttaaacagacggtagctcaaggtaagcgcgccaagcaaaagatgattgaagcgaac
ttacgcttagtagtggcgatcgccaaaaaataccaaaaacgcaatatggagtttttggat
ctaatccaagagggaactttaggattagaaagaggcgtagagaaatttgaccctatgcgg
ggttataaattctccacctacgcttactggtggattcgccaagcaattacccgtgcgatc
gctcaacaagggcgcaccatccgcctacctatccatattaccgagaaactgaacaaaatt
aaaaaagtccaacgcgaactagctcagactttagggcgatcgccttctccagccgaaatc
gccaaagaactagaactagaacctgctcagattcgtgagtatctgaacatggcgcgccaa
ccagtttctttggatgtgcgagtaggtgacaaccaagatacagaactccaagaaatgctc
gaagatgaaggcccatctccagagtattacactactcaagagttcctccgccaagactta
aacaccttgttagcggaactcacaccccaacaaagagaagtgttagcactccgctttggt
ttagaggatggtaacgaaatgtctctagcaaaagtcggtgaacgcttaaacctcagccgt
gaacgcgtccgccaactagaacaccaagccttagctcatctccgtcgtcgtcgagctaat
gtcaaagagtacgttgctagctag
DBGET
integrated database retrieval system