Nostoc sp. CENA543: CLI64_11665
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Entry
CLI64_11665 CDS
T05285
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
noe
Nostoc sp. CENA543
Pathway
noe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLI64_11665 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noe03019
]
CLI64_11665 (recQ)
03400 DNA repair and recombination proteins [BR:
noe03400
]
CLI64_11665 (recQ)
Enzymes [BR:
noe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLI64_11665 (recQ)
Messenger RNA biogenesis [BR:
noe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLI64_11665 (recQ)
DNA repair and recombination proteins [BR:
noe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLI64_11665 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
GerE
HTH_24
HTH_38
HTH_11
MarR
HTH_29
HTH_7
HTH_5
HTH_IclR
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AUT01003
UniProt:
A0A2I8A6M1
LinkDB
All DBs
Position
2830409..2832562
Genome browser
AA seq
717 aa
AA seq
DB search
MLQYPNLEQALKYHFGYDNFRPGQRQIIQDALQNRDLLIVMPTGGGKSLCFQLPALMKTG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNPYQVRSREEAIVNGKVKLLYVAPEKL
LSERFLPFLDLVHEKIGISIFAIDEAHCVSEWGHDFRPEYRQLKLLRKRYANVPMLALTA
TATDRVRSDIIQQLGLKQPSIHLASFNRQNLYYEVRAKSKQAYAELLELIRDTEGSVIVY
CLTRKKVEELTFKLQNDKVSVLPYHAGLPDDERSKNQTRFIRDDVRVMVATIAFGMGINK
PDVRLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFADIKTIEWSIEQKTEPQEQL
IARQQLRQMIDYAEGTDCRRTIQLGYFGERFAGNCANCDNCRHPKPLEDWTIEAMKFLSC
VARCKERFGMLHIIDVLRGAKKEKIMQYEHDKLSTYGIGKDRTADEWRILGRSLLHQGLL
EQTTDGYSVLKLNALSWEVMRRQRQVLLSVPVAQKVRLVPDNPKAEIAEALLQRLRSLRK
QLADEQSVPPYVVFHDSTLKLMAQVQPKNLAEFGKLSGVGSHKLAQYGEKFLSEIRAYIQ
EENSTTKSLEYTPSLSLVSGTELQTLQLHQQGLNIAQIAQKRNLSPATIASHLEKLIEKN
QPVDLNQLVPLEHQQKIWQVLEVLGDIPLTPIKEQLGNSYTFDEIRLVREKWRRQRK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtatcccaatctcgaacaagcgttaaaatatcacttcggttatgataacttt
cgtccaggacaacggcaaattatccaagacgcgctgcaaaatcgggatttattgatagtg
atgcctacgggtgggggaaaatctttgtgctttcagttacctgcactgatgaaaacagga
ctgactgtcgtggtatcaccgttaattgccctgatgcaagaccaagtagaagcactgcga
aataataatatctcagctaccttcctcaatagtagtttgaatccctaccaagtgcgatcg
cgggaagaagccattgtcaatggtaaggtaaaattgctctacgtcgccccagaaaagctg
ctgagtgaaagatttctcccttttctggatttagttcatgaaaaaattgggatatcgata
tttgcaattgatgaagcgcactgtgtttcggaatggggacatgattttcggccagaatat
cgtcagttaaagttactgcgaaagcgttacgccaatgttcccatgctggcgttgacagca
accgccacagaccgcgtccggtctgatatcattcaacaattaggcttaaaacagccgagt
attcatcttgctagttttaatcggcaaaatttatattacgaagtccgcgccaaaagtaag
caagcttacgccgaattattagaattaattcgggatacggaaggctcagttattgtttat
tgtttaacgcgtaaaaaggttgaagaactaacttttaaactgcaaaatgataaggtttcc
gtcttaccttatcacgccggtttacctgatgatgaacggagtaaaaatcaaacgcgattt
attcgggatgatgtgcgggtgatggtggcaactatcgcctttgggatgggaattaataaa
cctgatgtgcggttagtggttcattttgatattccccgaaatttagagagttactatcaa
gaatcaggtagggcgggaagagacggcgaaccatcacgatgtacaatcttttttagtttt
gctgatattaaaaccattgaatggagtattgaacaaaaaaccgaaccccaggaacaattg
attgccaggcaacaactccggcaaatgatagactatgctgaagggacagattgtcggcgg
acaattcaactaggttattttggcgaacgctttgcaggtaattgtgctaactgtgataat
tgtcgccatcccaaacctttagaagattggacaattgaagccatgaagtttttatcttgt
gtggcgcgatgtaaagaaagatttgggatgttacacattattgatgtgttgcgtggggcg
aaaaaagagaagattatgcaatatgaacatgataaactttctacctacggtataggtaaa
gatagaaccgcagatgaatggcgaattttgggaagatcgcttttacatcaaggtttatta
gaacaaactaccgatggttattctgtactgaaattaaatgcgttaagttgggaagtaatg
cgccgtcaacgccaagttttattatctgttcctgtggcgcaaaaagtgcggttagtcccc
gataatcccaaagctgagattgcagaagcattattacagagattacgatcgctgcgtaaa
caactagccgatgaacagtctgtacctccttatgtagtctttcacgattctactttgaaa
ttaatggcacaggtacagccgaaaaatttagccgaattcggtaaactttctggtgtaggt
agtcataaactcgcccaatatggggaaaaatttctctcagaaattcgcgcctatattcaa
gaagaaaattcgacaactaaatcacttgaatatacaccctcactcagcttagtttctggg
actgaattacagacattacagttacaccagcaaggcttaaatattgctcaaatcgcccaa
aaacgcaatttaagcccagctactattgctagtcatttagaaaaactcatcgaaaaaaat
cagcctgtagacttaaatcaattagtccctttggaacatcagcaaaagatttggcaagtt
ttagaagttctgggtgatattcccttaaccccaattaaagaacagttaggcaatagttat
acctttgatgagattcgcctagtgcgggaaaaatggcgacgacaacgcaagtag
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