Nostoc sp. CENA543: CLI64_12530
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Entry
CLI64_12530 CDS
T05285
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
noe
Nostoc sp. CENA543
Brite
KEGG Orthology (KO) [BR:
noe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
noe03009
]
CLI64_12530 (rimO)
Enzymes [BR:
noe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLI64_12530 (rimO)
Ribosome biogenesis [BR:
noe03009
]
Prokaryotic type
ribosomal protein modification factors
CLI64_12530 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AUT01163
LinkDB
All DBs
Position
complement(3056546..3057862)
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AA seq
438 aa
AA seq
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MGEKPTIAISHLGCEKNRIDTEHMLGLLVEAGYGVDANEELADYVIVNTCSFIEAAREES
VRTLVELAEANKKIVITGCMAQHFQGQLLEELPEAVAVVGTGDYHQIVNVIERVEQGERV
KQVSAEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVA
EAQQLANQGVQEIILISQITTNYGLDIYGKPKLAELLRALGKVDIPWIRMHYAYPTGLTP
DVIAAIQETPNVLPYLDLPLQHSHPEVLRAMNRPWQGRVNDEIIERLKTAIPGAVLRTTL
IVGFPGETEAHFEHLLEFVHRHEFDHVGVFTFSPEEGTPAHTLPNQLPQAVMDERRDRLM
AIQQPISWQKNQQEIGKIVEVLIEQENPGSGKLIGRSGRFSPEVDGQVYISGQAKLGTIV
PVKIHGADEYDLFGEVAL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaagccaacaatagcaatctctcacttgggctgtgagaaaaatcgaattgat
acagaacatatgttagggctgctagtagaagcaggatatggtgtagatgccaatgaagag
ttagcagattacgttatagtcaatacttgtagttttattgaagcagctagggaagaatct
gttagaacattagtagaactggcagaagctaacaaaaaaatcgtgattacaggctgtatg
gcacagcacttccaaggacaattattggaagaattgccagaagccgtggccgtggttggc
actggagattatcatcaaatcgtcaatgtcatagaaagggtagaacaaggggaaagggtt
aaacaggttagtgccgaacccacttatattgccgatgaaaccacaccccgctaccgtacc
actaccgaaggcgtagcttatttgcgagttgcagaagggtgtgattaccgttgtgcattt
tgtattattccccatctgcgcggcaaccaacgatcgcgtacaatagaatcaatagttgct
gaagcccagcaactagcaaatcaaggggtgcaagagatcattctcatttcccaaatcacc
acaaattacgggttagatatttacggtaagcccaaactagccgaattgctccgagcattg
gggaaagtggatataccgtggattaggatgcactacgcctatcccactgggctaacccca
gacgtgatcgcagccattcaggagacacctaacgtcttaccttacttagatttacccctg
caacattcccacccagaggtattgcgggcgatgaatcgtccttggcagggacgcgtcaat
gatgagattatcgaacgcctcaaaaccgccataccaggtgcagttttgcggacaacattg
atagtgggctttcctggggaaacagaagcgcactttgagcatttgctagagtttgtccat
aggcacgaatttgatcatgtgggagttttcaccttttcaccagaagagggaacacctgca
catacactacccaatcaattgccacaagctgtcatggatgaacgccgcgatcgcctgatg
gcaatccagcagcctatctcttggcaaaaaaatcagcaggaaatcggcaaaattgttgaa
gtcctgattgagcaggaaaaccctggaagtgggaaattaatcggtcgttccggcagattt
tcccccgaagttgatggtcaagtctacatcagtggccaagccaagttaggaactatcgta
cccgtaaaaattcacggagcagatgagtacgatttgtttggcgaagtcgccctataa
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