Nocardioides sp. TF02-7: MF408_06365
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Entry
MF408_06365 CDS
T10483
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nof Nocardioides sp. TF02-7
Pathway
nof03020
RNA polymerase
Brite
Enzymes [BR:
nof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MF408_06365
Transcription machinery [BR:
nof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MF408_06365
DNA repair and recombination proteins [BR:
nof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MF408_06365
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UMG93776
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Position
complement(1247498..1250275)
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AA seq
925 aa
AA seq
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MLDVNFFDQLQIGLATADDIRTWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDARHRDLSSLESKIQMQRENIQKRRDSIVEERAQKLETD
LAQLEAEGAKADQKRKVREGGEREMDKLRARHDAEIARLEEVWETFKNLKVQDLMGDEVL
YRELKTWFGKYFEGYMGATAIQKRLENFDIDAEVASLRDTIANGKGQRKVRALKRLKVVE
AFRKTGNKPQGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVSGPQLKLHQCGLPKQMALELFKPFVMKRLVDLSHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPSDGRPVTMPTQDMIIGLYFLTTEREGSAGEGR
VFSSPAEAIMAFDRGEITLQSKVRIRFTDAVVQGVEPGEPVTMETTLGRALFNDTLPADY
PYVNYEVGKKQLGQIVNDLAERYGKVEVAASLDALKDTGFHWATRSGVTVSIADVTTPPN
KAEILGEFEEKAAKIQKQFERGLITDDERRQELIEIWTEAGKLVGDAMEAAFDKTNPIFM
QVISGASGNFNQIRQVGAMRGLVANPKGEIIPRPIKANFREGLSVLEYFISTHGARKGLA
DTALRTADSGYLTRRLVDVSQDVIIREDDCGTERGLPKRIGVRNEAGVVLKDENVETSAY
ARTAAVDITHPDSGEGARLRRRRPG
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgaccagcttcagatcggcctggccaccgcggacgacatc
cgcacgtggagccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagcgtgacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctccaaggtgcgccgcgagcggatgggccacatcgagctcgccgccccg
gtgacccacatctggtacttcaagggcgtgcccagccggctcggctacctgctcgacctg
gcgccgaaggacctggagaaggtcatctacttcgccgcctacatgatcaccagcgtcgac
gaggacgcgcgccaccgcgacctctcctcgctcgagtcgaagatccagatgcagcgcgag
aacatccagaagcgccgcgactcgatcgtcgaggagcgggcgcagaagctggagaccgac
ctcgcccagctcgaggccgagggtgccaaggccgaccagaagcgcaaggtccgcgagggc
ggcgagcgcgagatggacaagctccgcgcccggcacgacgccgagatcgcccggctcgag
gaggtctgggagaccttcaagaacctcaaggtccaggacctgatgggcgacgaggtcctc
taccgcgagctgaagacctggttcggcaagtacttcgagggctacatgggcgccacggcg
atccagaagcgcctcgagaacttcgacatcgacgccgaggtcgcctcgctgcgcgacacg
atcgccaacggcaagggccagcgcaaggtccgtgccctcaagcggctcaaggtcgtcgag
gcgttccgcaagaccggcaacaagccgcagggcatggtgctcgacgcggtgccggtcatc
ccgccggacctgcggccgatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctctaccgccgggtcatcaaccgcaacaaccggctcaagcggctgctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgactcg
ctgttcgacaacggccgccgtggccgtccggtcaccggcccgggcaaccggccgttgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccggtcggtcatcgtgtcgggtccgcagctcaagctgcaccag
tgcggcctgccgaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgtcgcacgcccagaacatcaagtccgccaagcggatggtcgagcgggcccgc
ccggtcgtgtgggacgtgctggaggaggtcatcaccgagcacccggtgctcctcaaccgg
gcgcccacgctgcaccgtctcggcatccaggcgttcgagccgcagctgatcgagggcaag
gcgatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggcgaccag
atggcggtgcacctgccgctgtcggccgaggcccaggccgaggcgcggatcctgatgctg
tcgaccaacaacatcctcaagccgtccgacggccggccggtcaccatgccgacccaggac
atgatcatcggcctctacttcctcaccaccgagcgtgagggctcggccggtgagggccgg
gtgttctcgtcgccggccgaggcgatcatggcgttcgaccggggcgagatcacgctgcag
agcaaggtccgcatccggttcaccgacgcggtcgtgcagggcgtcgagcccggcgagccg
gtcaccatggagaccaccctgggccgggcgctgttcaacgacaccctgcccgccgactac
ccgtacgtgaactacgaggtcggcaagaagcagctcggtcagatcgtcaacgacctcgcc
gagcgctacggcaaggtcgaggtcgccgcgtcgctcgacgcgctcaaggacaccggcttc
cactgggccacccggtccggcgtgacggtgtcgatcgccgacgtgacgacgccgcccaac
aaggcggagatcctcggcgagttcgaggagaaggctgcgaagatccagaagcagttcgag
cgcggcctgatcaccgacgacgagcgtcgccaggagctcatcgagatctggaccgaggcc
ggcaagctggtcggtgatgcgatggaggcggcgttcgacaagacgaacccgatcttcatg
caggtcatctccggtgcctccggaaacttcaaccagatccgccaggtcggcgccatgcgt
ggcctggtggcgaaccccaagggcgagatcatcccgcggccgatcaaggcgaacttccgc
gagggtctctccgtgctggagtacttcatctccacccacggcgcccggaagggcctggcc
gacaccgcgctgcgcaccgccgactcgggctacctgacccggcgcctggtcgacgtgtcg
caggacgtcatcatccgcgaggacgactgcggcaccgagcgcggcctgcccaagcggatc
ggtgtccgcaacgaggcgggcgtggtcctcaaggacgagaacgtcgagacctcggcgtac
gcccggaccgcggcggtcgacatcacccaccccgactccggggagggtgctcgcctccgc
cggcgacgacctgggtga
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