Nocardioides sp. TF02-7: MF408_16565
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Entry
MF408_16565 CDS
T10483
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nof Nocardioides sp. TF02-7
Pathway
nof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MF408_16565 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nof03019
]
MF408_16565 (orn)
03009 Ribosome biogenesis [BR:
nof03009
]
MF408_16565 (orn)
Messenger RNA biogenesis [BR:
nof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MF408_16565 (orn)
Ribosome biogenesis [BR:
nof03009
]
Eukaryotic type
Pre-60S particles
RNases
MF408_16565 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UMG91681
LinkDB
All DBs
Position
complement(3224150..3224797)
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AA seq
215 aa
AA seq
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MNERLVWIDCEMTGLDLRTDALVEVAALVTDFDLNVLGDGVDIIVKPPAEALDQMIDFVR
NMHETSGLLDQLATGSSLAEAEEQVMAYIAEHCPPESRPPLAGNSVATDRGFLARDMPRL
DAFLHYRIVDVSSIKELARRWYPRAYYGAPTKRGNHRALADIQESIEELRYYRDTIFVPL
PGPDKVAAKVAAERHGGSITGLGLPVDDTDSAAGH
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagcgactcgtgtggatcgactgcgagatgaccggtctcgacctgcgcaccgac
gcgcttgtcgaggtcgccgcgctcgtgaccgacttcgacctcaacgtgctcggagacggc
gtcgacatcatcgtcaagcccccggccgaggcgctcgaccagatgatcgacttcgtccgc
aacatgcacgagacctccgggctgctcgaccagctcgcgaccggctcctccctcgccgag
gccgaggagcaggtgatggcctacatcgccgagcactgccccccggagagccggccgccg
ctggcgggcaactccgtcgcgaccgaccgggggttcctcgcgcgcgacatgccgcggctc
gacgcgttcctccactaccggatcgtcgacgtcagctcgatcaaggagctggcgcggcgc
tggtacccgcgggcctactacggcgcacccaccaagcgcggcaaccaccgggcgctggcc
gacatccaggagagcatcgaggagctgcgctactaccgcgacacgatcttcgtgccgctc
ccgggtcccgacaaggtcgccgccaaggtcgcggccgagcggcacggcggctcgatcacc
ggcctgggcctcccggtggacgacaccgattctgccgccgggcactga
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