Nocardioides sp. TF02-7: MF408_17355
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Entry
MF408_17355 CDS
T10483
Name
(GenBank) ATP-dependent helicase
Organism
nof Nocardioides sp. TF02-7
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
UMG91801
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Position
3373469..3376912
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AA seq
1147 aa
AA seq
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MTPTTATTATTYRLAAPAPATPPPALDEHQRRVVDHPGGPLLVLAGPGTGKTTTLVEAIV
DRVERRGAAPDSVLALTFSRKAAEQLRDRVTARLGRTTGTQLSSTFHSFAYSLVRRFAPA
ELYEGPLRLLSAPEQDVVLRELLTDHPESVRWPERLHRALGTRGFAREVHAVLARAREKG
LDGHALHALGVAEGIDEMVAAGLFLEQYLDSLDSQGATDYADLIRRAQIEAEVNRDELLG
RYQHVFVDEYQDTDPGQVALLRAITRGAQELVVVGDPHQSIYGFRGADVRGILEFPTRFP
RPDGTPADVVALRTTRRFGPRILVAAQRVARRIGLPGTIDEAAREAFLAPVAERGAHGDG
SVRVTTFDTERAEADHLADLLRRAHLEDGVAWDEMAVLVRSGRNHIPPLRRALGAAGVPV
EVASDEVPLVRDPAVLPLLDALRAVVHLDVTDHDHVGYVDPGRAEALLTGPLGGLDAGDV
RRLARQLRAREKDAAQASGATPRTSRELVRLAVVDAGHLDGLEGAEVDRARGLAALLARA
RAELEAGADAEELLWTLWAGTSWPQRLRRAVDTGGAAARRAHRDLDSVCALFDVAVRAGE
RREHLGVAAFLESLVQQEIPADTLADRGARGAAVRLLTAHRSKGLEWRLVVVAHVQDGAW
PDLRRRTTLLQADRIGPPTATGEATLVPPVTARELLAEERRLFYVACTRARERLVVTAVR
SPDDEGEQPSRFLEELVPTTDQIQHVVGRPPRPLSMGGLVADLRRTAADPAAPAALREAA
ARRLARLATATGAGERQLVPAADPATWWGTRAASRSVRPIREADQPVPVSASVLDAIAVC
PDPVVPRGRGRWPGARAPVGQPRADRPRPRRAGRRRQRTGRPRPADGRGRRGVGPARLPH
ALVQAARARPGPRGAGAVPRLARRQPAPTARDRGAVLHGRGDGRRQPGPDPRLRRPGRAR
RRRPGRGRRPQDRPHRPRAVPPCGPTCSWRSTSTPSTPAPSTVPTRSSPGWSRGCRAGAA
RARGRFRRGHRAAAGAPRRRRRAASRVAGSGSPRRRGCCARSSSPRSRATTAAGAASSPC
ARRAAPDRWWCSDRRTGRRHGRHQRSCRPAAGDAGEVPRRARSSGGRSRRRSRRWSSSRV
RAPARPR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccacgaccgccaccaccgcgacgacctaccggctcgccgcgccggcgccggcc
acgccgccgccggcgctcgacgagcaccagcgccgcgtcgtcgaccacccgggcgggccg
ctgctggtcctcgccgggccgggcaccggcaagacgacgaccctggtcgaggcgatcgtc
gaccgggtcgagcggcggggcgcggcgcccgactcggtgctggcgctcacgttctcccgc
aaggccgccgagcagctccgggaccgggtgacggcgcggctggggcgcacgaccggcacc
cagctcagctcgacgttccactccttcgcctactcgctggtgcgccggttcgcgcccgcg
gagctctacgagggcccgctgcggctgctgtcggcccccgagcaggacgtcgtgctgcgc
gagctgctcaccgaccaccccgagtcggtgcgctggcccgagcggctgcaccgcgccctc
ggcacccgcggcttcgcgcgggaggtgcacgccgtgctggcccgcgcccgcgagaagggg
ctcgacggccacgcgctgcacgcgctcggcgtcgccgagggcatcgacgagatggtcgcc
gcgggcctgttcctcgagcagtacctcgactccctcgacagccagggtgcgaccgactac
gccgacctgatccggcgggcgcagatcgaggcggaggtcaaccgcgacgagctgctcggc
cgctaccagcacgtgttcgtcgacgagtaccaggacaccgatccggggcaggtcgcgctc
ctgcgggcgatcacccgcggggcgcaggagctggtcgtggtcggcgacccgcaccagtcg
atctacggcttccgcggcgcggacgtgcgggggatcctcgagttccccacccggttcccg
cgccccgacggcacgcccgccgacgtggtggcgctgcgcaccacgcggcgcttcggcccg
cgcatcctcgtcgccgcccagcgggtcgcccgtcgcatcggcctgcccggcacgatcgac
gaggctgctcgcgaggcgttcctcgcgcccgtcgccgagcgcggcgcccacggcgacggc
tcggtgcgggtgacgacgttcgacaccgagcgggccgaggccgaccacctcgccgacctg
ctccgccgggcccacctcgaggacggcgtcgcgtgggacgagatggcggtgctcgtccgg
tcgggccgcaaccacatcccgccgctgcgccgggcgctcggtgcggcgggcgtgccggtc
gaggtggccagcgacgaggtgccgctggtgcgcgacccggccgtgctgccgctgctcgac
gcgctgcgcgccgtggtccacctcgacgtcaccgaccacgaccacgtcggctacgtcgac
ccgggccgggcggaggcgttgctgacggggccgctgggcggcctcgacgccggcgacgta
cgccgcctggcgcggcagctgcgggcgcgcgagaaggacgccgcgcaggcgagcggcgcc
acgccgcgcacgtcccgcgagctggtacggctggccgtcgtcgacgccggtcatctcgac
gggctcgagggcgccgaggtcgaccgggcccgcgggctcgcggcgctgctggcccgggcc
cgcgccgagctcgaggcaggcgccgacgccgaggagctgctgtggaccctctgggcgggc
acgtcgtggccgcagcggctgcggcgcgcggtcgacaccggcggggccgccgcccggcgc
gcccaccgcgacctcgactcggtctgcgccctcttcgacgtggcggtgcgggctggtgag
cgccgcgagcacctcggggtggcggcgttcctcgagagcctggtccagcaggagatcccc
gccgacaccctcgccgaccgcggcgcccgcggggcggcggtccgcctcctcaccgcccac
cgcagcaaggggctggagtggcggctggtcgtcgtggcgcacgtccaggacggcgcctgg
cccgacctgcgccgccgcacgacgctgctgcaggccgaccggatcgggcccccgaccgcg
accggcgaggcgacgctggtcccgcccgtgaccgcccgcgagctgctcgccgaggagcgc
cggctcttctacgtcgcctgcacccgcgcccgcgagcggctggtggtgaccgccgtccgg
tcacccgacgacgagggcgagcagccctcccgcttcctcgaggagctggtgccgacgacc
gaccagatccagcacgtcgtcggccgtccgccgcggccgctgtcgatgggcggcctggtc
gccgacctgcgacgcaccgccgccgaccccgccgcgcccgcggcgctgcgcgaggcagcg
gcccgccggctcgcccgcctggccacggccaccggcgcgggcgagcggcagctggtgccg
gcagccgaccccgccacgtggtggggcacccgcgccgcgagccggtccgtccggccgatc
cgcgaggccgaccagccggtgccggtgtcggcgagcgtgctcgacgcgatcgcggtctgc
cccgacccggtggttcctcgaggacgaggccggtggccgggtgcgcgcgccccagtcggc
caacctcgggcagatcgtccacgccctcgccgagcgggtcgccgacggcagcgcaccggc
cgacctcgacctgctgatggccgaggtcgacgcggtgtgggaccggctcgacttccgcac
gccctggtccaagcagcgcgagcacgcccgggtccgcgcggcgctggcgcggtacctcgc
ctggcacgccggcaacccgcgccgactgctcgcgaccgaggcgcggttctccacggtcgt
ggcgatggacgacggcagccaggtccggatccacggctacgccgaccgggtcgagctcga
cggcgacggccgggtcgtggtcgtcgacctcaagaccggccgcaccgcccccgagcggtc
ccgccgtgcgggcccacgtgcagttggcgctctaccagtacgccgtcgacgccggcgccc
tcgaccgtcccgacgaggagctcaccgggttggtcgcgggggtgccgagctggtgcagct
cgggctcgaggacggttccgccgcggtcaccgtgcagccgcaggagccccacgccggcga
cggcgagcagcgtcgcgcgttgcggggagcggatcgccgcgacggcgcggctgctgcgcg
aggagcagttccccgcgatcccgggcgaccactgccgcgggtgcggcttcctcgccctgt
gcccggcgcgcagcgccggatcggtggtggtgcagtgaccgccgcaccggccgtcgtcac
gggcggcatcaacggtcctgccgacctgcagcgggcgatgcgggcgaagttccccgccga
gcgaggagcagtggcgggcgatcacggcgccgctctcgccggtggtcgtcatcgcgggtg
cgggctccggcaagaccacgctga
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