Nocardioides sp. TF02-7: MF408_22250
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Entry
MF408_22250 CDS
T10483
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nof Nocardioides sp. TF02-7
Brite
KEGG Orthology (KO) [BR:
nof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nof03051
]
MF408_22250 (pafA)
Enzymes [BR:
nof01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
MF408_22250 (pafA)
Proteasome [BR:
nof03051
]
Prokaryotic proteasome
Bacterial regulatory particles
MF408_22250 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UMG92514
LinkDB
All DBs
Position
4276904..4278265
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFKGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVLDLVTHDKAGERVLEGLLLDAEQRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRAGEFSRLADVLIPFLVTRQIVCGAGKVTQTPRGTSYSVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTLLKVASCDLVLRMIEEGVVM
RDLTMENPIRAIREISHDVSGRRKVRLANGREASALDIQGEYLQKARDFVDRREISTPVI
ERALDLWERGLKAVESDDLGLVDREIDWVIKWKLIERYRARHGLPLSHPRVAQLDLAYHD
IHRGRGLYYLLEKRGAVARVTSDLKIFEAKSVPPQNTRARLRGEFIRRAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAHDERVQRLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccggatcttcgggatcgagaacgagtacggcgtcacctgcacgttcaagggg
cagcggcgcctcagccccgacgaggtggcccgctacctgttccgcaaggtcgtgtcctgg
ggccggtccagcaacgtcttcctccgcaacggcgcccggctctacctcgacgtcggcagc
cacccggagtacgcgacgcccgagtgcgacgacgtcctcgacctggtcacccacgacaag
gcgggggagcgggtgctggaggggctgctcctcgacgccgagcagcggctccacgacgag
gggatcgccggcgagatctacctgttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaactacctggtcagccgggccggcgagttcagccggctggccgacgtc
ctgatcccgttcctcgtgacccggcagatcgtgtgcggcgccggcaaggtgacgcagacc
ccgcgcgggacgtcgtactccgtgagccagcgcgccgagcacatctgggagggcgtctcg
agcgccaccacccgcagccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagaagtaccgccggctgcacgtgatcgtcggcgacagcaacatgagcgagaccacgacg
ctgctcaaggtggcgtcgtgcgacctggtgctgcggatgatcgaggagggggtcgtgatg
cgcgacctcacgatggagaacccgatccgggcgatccgggagatctcccacgacgtctcc
ggccggcgcaaggtgcggctcgccaacggccgcgaggccagcgccctcgacatccagggc
gagtacctccagaaggcccgcgacttcgtcgaccggagggagatcagcaccccggtcatc
gagcgcgcgctcgacctctgggagcgcggcctgaaggccgtcgagtccgacgacctcggg
ctcgtcgaccgcgagatcgactgggtcatcaagtggaagctgatcgagcgctaccgcgcg
cggcacggcctgccgctgagccacccgcgggtcgctcagctcgacctcgcctaccacgac
atccaccgcggccgaggcctctactacctgctggagaagcggggcgcggtcgcccgggtg
accagcgacctgaagatcttcgaggcgaagtcggtgccgccgcagaacacccgcgcgcgg
ctgcgcggcgagttcatccggcgggcccaggagcggcggcgcgacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcggaccgtcctctgcaaggacccgttccgc
gcccacgacgagcgggtgcagcgcctcatcgacggcatgtga
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