Nocardioides sp. TF02-7: MF408_23080
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Entry
MF408_23080 CDS
T10483
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nof Nocardioides sp. TF02-7
Pathway
nof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MF408_23080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nof03400
]
MF408_23080
Enzymes [BR:
nof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MF408_23080
DNA repair and recombination proteins [BR:
nof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MF408_23080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
UMG92622
LinkDB
All DBs
Position
complement(4435443..4436909)
Genome browser
AA seq
488 aa
AA seq
DB search
MTPDEPDTALPGLVRAAARASGERARARRARQAAAVEPAATAPVARVLVDLPLAHLDRTF
DYAVPAGMADDVRPGVRVKVRFAGQDVDGFVVERTDASDHPGRLAPIRRVVSAEPVLTPA
VAELCRRVADRYAGTSADVRRLAVPPRHATVEKEPARPATPPPAVTGAEEAWAAYPTAGA
FLRHLRDGGAPRAVWAAAPGDDWPLMIAHLAAAASGGGRGALVCVPDHRDVGRVDAALRE
LLGDDQHVTLRAGPGPGPRHRDFLLVSRGARRIVVGTRSAAFAPVHDLGLVVVWDDGDDL
HAEPRAPYPPHPRGAARAGPHRGHRSAGRRVRPQRRGRAAAALRLGPRARDAARRGAPSG
VGRCRRRFRARPPPRPPPGTRAHRGARRDPVGARTRSGARADAARGLRARARVRPLPHPR
PLRPVRGAAAAHRRHDAAAVPLVRHRGPGMDVRRVRGPRAAGARRRRRPHRRRARPCVRA
GAGRDLVG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgacgagcccgacaccgccctgccggggctggtgcgggccgccgcccgggcg
tcgggggagcgggcccgcgcgcgccgggcccggcaggccgccgccgtcgagccggcggcg
accgcgccggtcgcgcgggtcctggtcgacctgcccctcgcccacctcgaccgcaccttc
gactacgccgtcccggccgggatggccgacgacgtgcgcccgggggtgcgggtgaaggtg
cggttcgccggccaggacgtcgacgggttcgtggtcgagcgcaccgacgccagcgaccac
ccgggccggctggccccgatccgccgggtggtcagcgccgagccggtgctgaccccggcc
gtcgccgagctgtgccggcgggtggcggaccgctacgccggcaccagcgccgacgtacgc
cggctcgcggtgccgccgcggcacgcgacggtcgagaaggagccggcgcggcccgcgacg
cccccgcccgccgtgaccggcgccgaggaggcctgggccgcctacccgaccgccggcgcc
ttcctgcgccacctgcgcgacggcggcgccccgcgggccgtgtgggcggcggctcccggc
gacgactggccgctgatgatcgcccatctcgccgcggccgcgtcggggggcggccgcggc
gccctcgtgtgcgtgcccgaccaccgcgacgtcggtcgcgtcgacgccgcgctgcgggag
ctgctcggcgacgaccagcacgtcaccctccgggccgggccggggcccggccctcgccac
cgcgacttcctgctcgtgagcaggggagcgcggcggatcgtggtcggcacgcggtcggcg
gcgttcgcgccggtgcacgacctcggcctggtggtggtgtgggacgacggcgacgacctg
cacgcggagccgcgggcgccctaccccccacacccgcgaggtgctgctcgagcgggcccg
catcgagggcaccgcagcgctggtcggcgggttcggccgcagcgtcgaggccgagcagct
gctgcgctccggctgggcccgcgagctcgcgatgccgcgcgccgaggtgcgccgtcgggc
gttggtcggtgtcgccggcggttccgagcacgccctccgccgcgacccccacccggcacg
cgtgcccaccgaggcgcacgacgcgatccggtgggggctcgaacgaggtccggtgctcgt
gcagacgccgcgcgcgggttacgtgctcgcgctcgcgtgcgaccgctgccgcacccccgc
ccgctgcggccggtgcgcggggccgctgcagctcaccggcgccacgacgccgccgcagtg
ccgctggtgcggcaccgaggccccgggatggacgtgcggcgagtgcgggggccacgggct
gcgggcgcccgtcgtcggcgacgcccgcaccgccgacgagctcggccgtgcgttcgcgcc
ggtgccggtcgtgacctcgtcgggtga
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