Novosphingobium sp. Gsoil 351: GKE62_00890
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Entry
GKE62_00890 CDS
T06443
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nog
Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_00890 (radA)
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GKE62_00890 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
DnaB_C
ChlI
Lon_C
RecA_N
AAA
AAA_30
nSTAND_NTPase5
AAA_16
AAA_22
Zeta_toxin
nSTAND3
DAP3
zf-RING_10
MCM
NTPase_1
NACHT
AAA_24
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QGN53320
LinkDB
All DBs
Position
182312..183682
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AA seq
456 aa
AA seq
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MSKLKRRYVCQACGGVSSRWQGQCADCAEWNTLSEEAPATVFSEKHHLSTGGRAFPFVAM
DEPLALPSRRPTGLAEFDRALGGGLVPGSAILMGGDPGVGKSTLLLQAAAKVALAGGDAV
YISGEEAADQVRLRAQRLGLGNAPIRLATASSVRDILTTLGGIRPPALLVIDSIQTMHSD
QIEGAPGTVSQVRGCAFELIRYAKASGTVVVLVGHVTKDGSIAGPRVLEHMVDVVMSFEG
ERSHQFRILRALKNRYGAVDEIGVFAMAGAGLEEVANPSSLFLSGRDAEVPGSAVFPALE
GTRPVLVEIQALTVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLNFSSAEVYLNVAG
GYRLTDPAADIAVAAALVSALAERPCPAESIWFGEISLAGEVRPVAHPGLRLKEAAKLGF
TRSFGPDAGNGDIPPALRHEPLRLLPNVVDRIVASP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagctcaaacgccgctatgtctgccaagcctgcggcggggtgtcgtcgcggtgg
caggggcaatgcgccgattgcgccgagtggaacaccttgagcgaggaagcgccggcgacg
gtgttctccgaaaagcaccacctctctaccggcgggcgggcgtttccgttcgtggcgatg
gacgagccgctggcgctgccgtcgcgccgtcccacagggctggccgagttcgaccgcgcg
ctggggggagggttggtgcccgggtccgccatcctgatgggcggcgatcctggcgtcggc
aaatccacgctgctgctccaggccgcggccaaggtggcgctggcgggaggcgacgcggtc
tacatcagtggtgaggaagccgccgaccaggtacgccttcgcgcgcagcgcctcggtctc
ggcaacgcgccgatccggctcgccacggccagttcggtgcgcgacatcttgaccacgctg
ggtggtatccgtccgcccgcgctgctggtgatcgattcgatccagacaatgcattccgac
cagatcgagggcgcgccaggcaccgtgagccaggttcgcggctgcgcgttcgaactgatc
cgctatgccaaggccagcggcacggtggtggtgctggtcggccatgtgaccaaggacggc
agcatcgccgggccgcgcgtgctcgagcatatggtcgacgtggtgatgagcttcgagggc
gagcgcagccaccagttccggatcctgcgcgcgctcaaaaaccgttacggcgcggtcgac
gagatcggcgtgttcgcgatggccggggcagggctggaggaagtcgccaacccgtcgagc
ctgttcctttcgggccgcgacgccgaagtgccgggcagcgcggtgttccccgcgctggaa
gggacccgtccggtgctggtcgagattcaggcgctgacggtgcgtctggccagcggggcc
accccgcggcgcgcggtggtcggctgggattcggggcggctggcgatgatcctggcggtg
ctggaggcgcgctgcgggctgaatttctcctcggccgaagtctatctcaacgtggccggc
ggctatcgcctgaccgatcccgcggccgacatcgccgtcgccgccgcgctggtctcggcg
ttggccgaacggccgtgcccggcggaatcgatctggttcggcgaaatctcgttggccgga
gaggtccgcccggtggcccatcccggcctgcgcctgaaggaagcggcgaaactcggcttc
acccgatcgttcggccccgacgccggcaacggggacatcccgcccgccttgcgccatgag
ccgctgcggcttttgccgaacgttgttgaccggatcgtcgcgagcccataa
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