KEGG   Novosphingobium sp. Gsoil 351: GKE62_00960
Entry
GKE62_00960       CDS       T06443                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nog  Novosphingobium sp. Gsoil 351
Pathway
nog00010  Glycolysis / Gluconeogenesis
nog00020  Citrate cycle (TCA cycle)
nog00260  Glycine, serine and threonine metabolism
nog00280  Valine, leucine and isoleucine degradation
nog00310  Lysine degradation
nog00380  Tryptophan metabolism
nog00620  Pyruvate metabolism
nog00630  Glyoxylate and dicarboxylate metabolism
nog00640  Propanoate metabolism
nog00670  One carbon pool by folate
nog00785  Lipoic acid metabolism
nog01100  Metabolic pathways
nog01110  Biosynthesis of secondary metabolites
nog01120  Microbial metabolism in diverse environments
nog01200  Carbon metabolism
nog01210  2-Oxocarboxylic acid metabolism
nog01240  Biosynthesis of cofactors
Module
nog_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nog_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nog_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nog_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nog00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GKE62_00960 (lpdA)
   00020 Citrate cycle (TCA cycle)
    GKE62_00960 (lpdA)
   00620 Pyruvate metabolism
    GKE62_00960 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    GKE62_00960 (lpdA)
   00640 Propanoate metabolism
    GKE62_00960 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GKE62_00960 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    GKE62_00960 (lpdA)
   00310 Lysine degradation
    GKE62_00960 (lpdA)
   00380 Tryptophan metabolism
    GKE62_00960 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GKE62_00960 (lpdA)
   00670 One carbon pool by folate
    GKE62_00960 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nog04147]
    GKE62_00960 (lpdA)
Enzymes [BR:nog01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GKE62_00960 (lpdA)
Exosome [BR:nog04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GKE62_00960 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored NAD_binding_8 FAD_binding_2 HI0933_like GIDA FAD_binding_3 DAO AlaDh_PNT_C Thi4 2-Hacid_dh_C Amino_oxidase DUF4145 GMC_oxred_N 3HCDH_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QGN53331
UniProt: A0A6I5WTL0
LinkDB
Position
198863..200275
AA seq 470 aa
MADQYDVIVLGSGPGGYVAAIRAAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEIF
HYMQHAKDYGLAADNIRADLEAVVKRSRGVAKQLNQGIGHLMKKHRIAVHMGTGVLKGAG
KLEVTGEKGSETLSAKHIVVATGARARDLPFAKTDGKRIWTYRHAMVPPEMPGKLLVIGS
GAIGIEFASFYNDMGAEVTVVEMLDRVVPVEDADVSAFLEKALKKQGMTIMTGAGVESID
VGASGVKAKIKGKDGKVVESDFSHVIVAVGIAPNTENIGLEALGIKAERGIIVIDDYGRT
SVKGVWAIGDCTPGPWLAHKASHEGVTAAEAIAQELGNAEVHPHGMNRKNIPGCTYCHPQ
IASVGMTEAKAKEAGYSVKAGTFPFIGNGKAIALGEAEGFIKTVFDAKTGELLGAHMIGA
EVTELIQGYVVGKTLETTEAELMSTVFPHPTLSEMMHESVLAAYGRALHI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggctgaccaatacgatgtgatcgtcctgggctccggccccggcggatacgtcgcggcg
atccgcgcggcgcaattggggctcaagaccgcgatcgtcgagcgcgagctgctcggaggg
atttgcctcaactgggggtgcatcccgaccaaggcgctgctgcgttcggcggagatcttc
cactacatgcagcacgccaaggactatggcctggcggcggacaatattcgcgccgatctc
gaggcggtggtcaagcgcagccggggggtggccaagcagctcaaccagggcatcggccac
ctgatgaagaagcacaggatcgcggtccacatgggcaccggggtgttgaagggcgccggc
aagctggaggtgacgggcgagaaggggagcgagaccctctcggccaagcatatagtcgtc
gccaccggggcgcgggcccgcgacctgccgttcgccaagaccgacggcaagcgcatctgg
acctatcgccacgcgatggtcccgcccgagatgccgggcaagctgctggtcatcggcagc
ggcgccatcgggatcgaattcgccagcttctacaacgatatgggcgccgaagttacggtc
gtcgagatgctcgatcgagtggtgccggtggaggatgcggacgtctcggcgttcctcgaa
aaggcgctcaagaagcagggcatgacgataatgaccggcgcgggtgtcgaaagcatcgat
gtcggggcctctggcgtaaaggcgaagatcaagggcaaggacggcaaggttgtcgagagc
gatttcagccatgtgatcgtagcggtgggcattgctccaaataccgagaacatcggactc
gaagcgcttggaatcaaagccgaacgtgggataatcgtgatcgacgactatggccggacc
agcgtgaagggcgtgtgggcgatcggcgattgcacccccggcccatggctcgcccacaag
gccagccacgaaggcgtcaccgccgccgaggcgatcgcccaggagctgggcaatgccgaa
gtccatccccacggcatgaatcgcaagaacatccccggctgcacttattgccacccgcag
atcgccagcgtcgggatgactgaggccaaggccaaggaggcgggctattcggtcaaggcg
ggcaccttcccgttcatcggcaacggcaaggcgatcgcgctgggcgaggccgagggcttc
atcaagaccgtgttcgacgccaaaaccggcgagctgctcggcgcgcacatgatcggcgcc
gaagttaccgagttgattcaaggttatgtcgtgggcaagacgctcgagaccaccgaggcc
gaactgatgagcacggtgttcccgcaccccacgctcagcgaaatgatgcacgagagcgtg
ctcgccgcatacgggcgcgcgctgcacatctga

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