Novosphingobium sp. Gsoil 351: GKE62_00960
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Entry
GKE62_00960 CDS
T06443
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog00010
Glycolysis / Gluconeogenesis
nog00020
Citrate cycle (TCA cycle)
nog00260
Glycine, serine and threonine metabolism
nog00280
Valine, leucine and isoleucine degradation
nog00310
Lysine degradation
nog00380
Tryptophan metabolism
nog00620
Pyruvate metabolism
nog00630
Glyoxylate and dicarboxylate metabolism
nog00640
Propanoate metabolism
nog00670
One carbon pool by folate
nog00785
Lipoic acid metabolism
nog01100
Metabolic pathways
nog01110
Biosynthesis of secondary metabolites
nog01120
Microbial metabolism in diverse environments
nog01200
Carbon metabolism
nog01210
2-Oxocarboxylic acid metabolism
nog01240
Biosynthesis of cofactors
Module
nog_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nog_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nog_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
nog_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GKE62_00960 (lpdA)
00020 Citrate cycle (TCA cycle)
GKE62_00960 (lpdA)
00620 Pyruvate metabolism
GKE62_00960 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
GKE62_00960 (lpdA)
00640 Propanoate metabolism
GKE62_00960 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GKE62_00960 (lpdA)
00280 Valine, leucine and isoleucine degradation
GKE62_00960 (lpdA)
00310 Lysine degradation
GKE62_00960 (lpdA)
00380 Tryptophan metabolism
GKE62_00960 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GKE62_00960 (lpdA)
00670 One carbon pool by folate
GKE62_00960 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nog04147
]
GKE62_00960 (lpdA)
Enzymes [BR:
nog01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GKE62_00960 (lpdA)
Exosome [BR:
nog04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GKE62_00960 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
NAD_binding_8
FAD_binding_2
HI0933_like
GIDA
FAD_binding_3
DAO
AlaDh_PNT_C
Thi4
2-Hacid_dh_C
Amino_oxidase
DUF4145
GMC_oxred_N
3HCDH_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QGN53331
UniProt:
A0A6I5WTL0
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All DBs
Position
198863..200275
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AA seq
470 aa
AA seq
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MADQYDVIVLGSGPGGYVAAIRAAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEIF
HYMQHAKDYGLAADNIRADLEAVVKRSRGVAKQLNQGIGHLMKKHRIAVHMGTGVLKGAG
KLEVTGEKGSETLSAKHIVVATGARARDLPFAKTDGKRIWTYRHAMVPPEMPGKLLVIGS
GAIGIEFASFYNDMGAEVTVVEMLDRVVPVEDADVSAFLEKALKKQGMTIMTGAGVESID
VGASGVKAKIKGKDGKVVESDFSHVIVAVGIAPNTENIGLEALGIKAERGIIVIDDYGRT
SVKGVWAIGDCTPGPWLAHKASHEGVTAAEAIAQELGNAEVHPHGMNRKNIPGCTYCHPQ
IASVGMTEAKAKEAGYSVKAGTFPFIGNGKAIALGEAEGFIKTVFDAKTGELLGAHMIGA
EVTELIQGYVVGKTLETTEAELMSTVFPHPTLSEMMHESVLAAYGRALHI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaatacgatgtgatcgtcctgggctccggccccggcggatacgtcgcggcg
atccgcgcggcgcaattggggctcaagaccgcgatcgtcgagcgcgagctgctcggaggg
atttgcctcaactgggggtgcatcccgaccaaggcgctgctgcgttcggcggagatcttc
cactacatgcagcacgccaaggactatggcctggcggcggacaatattcgcgccgatctc
gaggcggtggtcaagcgcagccggggggtggccaagcagctcaaccagggcatcggccac
ctgatgaagaagcacaggatcgcggtccacatgggcaccggggtgttgaagggcgccggc
aagctggaggtgacgggcgagaaggggagcgagaccctctcggccaagcatatagtcgtc
gccaccggggcgcgggcccgcgacctgccgttcgccaagaccgacggcaagcgcatctgg
acctatcgccacgcgatggtcccgcccgagatgccgggcaagctgctggtcatcggcagc
ggcgccatcgggatcgaattcgccagcttctacaacgatatgggcgccgaagttacggtc
gtcgagatgctcgatcgagtggtgccggtggaggatgcggacgtctcggcgttcctcgaa
aaggcgctcaagaagcagggcatgacgataatgaccggcgcgggtgtcgaaagcatcgat
gtcggggcctctggcgtaaaggcgaagatcaagggcaaggacggcaaggttgtcgagagc
gatttcagccatgtgatcgtagcggtgggcattgctccaaataccgagaacatcggactc
gaagcgcttggaatcaaagccgaacgtgggataatcgtgatcgacgactatggccggacc
agcgtgaagggcgtgtgggcgatcggcgattgcacccccggcccatggctcgcccacaag
gccagccacgaaggcgtcaccgccgccgaggcgatcgcccaggagctgggcaatgccgaa
gtccatccccacggcatgaatcgcaagaacatccccggctgcacttattgccacccgcag
atcgccagcgtcgggatgactgaggccaaggccaaggaggcgggctattcggtcaaggcg
ggcaccttcccgttcatcggcaacggcaaggcgatcgcgctgggcgaggccgagggcttc
atcaagaccgtgttcgacgccaaaaccggcgagctgctcggcgcgcacatgatcggcgcc
gaagttaccgagttgattcaaggttatgtcgtgggcaagacgctcgagaccaccgaggcc
gaactgatgagcacggtgttcccgcaccccacgctcagcgaaatgatgcacgagagcgtg
ctcgccgcatacgggcgcgcgctgcacatctga
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