Novosphingobium sp. Gsoil 351: GKE62_01145
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Entry
GKE62_01145 CDS
T06443
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nog
Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nog03032
]
GKE62_01145 (gyrA)
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_01145 (gyrA)
Enzymes [BR:
nog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GKE62_01145 (gyrA)
DNA replication proteins [BR:
nog03032
]
Prokaryotic type
DNA Topoisomerases
GKE62_01145 (gyrA)
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GKE62_01145 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
QGN53362
LinkDB
All DBs
Position
232537..235182
Genome browser
AA seq
881 aa
AA seq
DB search
MKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILFASQEGGFVAGRPYRKCAKIVGDTMGN
YHPHGDSSIYFALVRMAQDWSMRVPLVDGQGNFGSMDPDDPASMRYTEARLAKVSNSLLD
DLDKDTVDFTENYDGSRREPTVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDACLA
TIDNPLISLDELMAIVPGPDFPTAPLILGSAGSRSAYATGRGSIIMRSRHVIEEGRGDRR
SIVLTSIPFQIGKNGLVEKLAEAAKDKRIEGVSDIRDESSRMGVRVVIDLKRDATPEVVL
NQVWRHSPAQSSFPANMLAIRGGRPELLSLKDILDAFIRFREEVITRRTKFELNKARDRA
HLLLGLVIAVTNLDEVVKIIRGAPNPAAARAQLIAREWPVGEIAPYIRLVEAIDDSTEVD
GAVYRLSELQVRAILELRLHRLTALGRDEIGGELEGLAEAIKGYLEILADRVKLYAVMRD
ELAAVRAAFATPRLSEIAPAWDGIEDEDLIEQEDMVVTVTLDGYIKRTALSTFRAQNRGG
KGRAGMATKEEDAVGTMFVTSTHNPVLFFSTAGKVYRLKVWRLPEGGPATRGRPIVNLLP
ALDQGETIAAVLTLPADEAEWGDLNVVFATARGGVRRNAMDAFANIPSNGKYAMRFEEGS
DDRLIGVALTEPGDDVLLATKCGKAIRFPADDVREFVSRTSTGVRGMTLKGDDEVISLSI
LHRVGVKDQDEREDYLRHAPWKPDRESDPAMSAERFAELAEKEQFILTVCANGYGKLSSA
YEYRRTNRGGQGITNIDNIARNGPVVASFAASKDDQLMLVTDQAKLIRLPLISLRVIGRG
SAGVRLFNVSDEEHVVSAVRLIDADQGEEAGEVPAATGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccagctacctcgattacgcgatgagcgtgatcgtcagccgcgcgctgcccgat
gtgcgcgacggcctcaagccggttcaccggcgcatcctgttcgccagccaggagggcggt
ttcgtcgccgggcggccctatcgcaagtgcgccaagatcgtcggcgacacgatgggcaac
tatcacccgcacggcgacagttcgatctacttcgcgcttgttcgcatggcgcaggactgg
tcaatgcgggtgccgctggtcgatggccagggcaacttcggctcgatggatcccgacgat
cccgcctcgatgcggtacaccgaggcgcggctggcgaaagtttccaacagcctgctcgac
gatctcgacaaggacaccgtcgatttcaccgagaactacgacggatcgcgacgcgagccg
accgtgctgccggcacgctttcccaacctgctggtcaacggcgcgggcgggatcgcggtg
ggcatggcgaccaacatcccgccgcacaacctgggcgaggtgatcgacgcctgcctcgcg
acgatcgacaacccgctgatctcgctagacgagctgatggcgatcgtgcccggccccgat
ttccccaccgcacccctgatcctgggctcggcgggctcgcgcagcgcctatgccacgggc
cgcggctcgatcatcatgcgctcgcgccacgtcatcgaggaaggccgcggcgatcggcgc
tcgatcgtgctgaccagcatcccgttccagatcggcaagaacggcctggtcgaaaagctc
gccgaagccgccaaggataagcggatcgagggcgtctccgacatccgcgacgaatcgagc
cggatgggcgtgcgcgtggtcatcgacctcaagcgcgacgcgacacccgaggtggtgctc
aaccaggtgtggcgccacagccccgcgcaatcgagctttcccgccaacatgctggcgatc
cgtggtggacggcccgagctgctcagcctcaaggacatcctggacgcgttcatccgcttc
cgcgaggaggtgatcacccggcgcaccaagttcgagctcaacaaggcgcgcgaccgggcg
cacctgttgctggggctggtgatcgcggtcaccaacctcgacgaggtggtgaagattatc
cggggcgctcccaatcccgccgcggcgcgcgcccaactgatcgcgcgcgaatggccggtg
ggcgagatcgcgccgtatatccgtctggtcgaggcgatcgacgattccaccgaagtcgac
ggcgcggtctatcgcctgtccgagcttcaggtccgcgcaatcctcgagttgcggctccat
cgcctgaccgcactgggccgcgacgagatcggcggcgagctggaagggctggccgaggcg
atcaagggctacctcgagatccttgccgaccgggtgaagctctatgccgtgatgcgcgac
gagctcgccgcggtgcgcgccgccttcgccacgccgcgcctgtccgagatcgccccggcg
tgggacgggatcgaggacgaggacctgatcgagcaggaggacatggtcgtcacggtcacg
ctcgacggctatatcaagcgcaccgcgctctccacattccgcgctcagaatcgcgggggc
aaaggccgcgcggggatggcgaccaaggaagaagatgcggtggggacgatgttcgtcacc
agcacgcacaatccagtgctgttcttctcgaccgcgggcaaggtctatcgtctcaaggtc
tggcggctgcccgagggcggcccggcgacgcgcggacgtccgatcgtcaacctcctcccc
gcgctcgaccagggcgagacgatcgccgcggtgctcaccttgcctgcagacgaggccgag
tggggcgacctcaacgtggtgttcgccaccgcccggggcggggtccgccgcaacgcgatg
gatgcgttcgccaatatcccgagcaacggcaagtatgcgatgcgcttcgaggaagggtcg
gacgaccgcctgatcggcgtggcgctgaccgaacccggcgacgacgtgctgctggcgacc
aagtgcggcaaggcgatccgctttccggcggacgatgtgcgcgaattcgtcagccgcacc
tctaccggagtacgcggcatgacgctgaagggcgacgacgaggtgatctcgctgtcgatc
ctccaccgcgtgggcgtgaaggaccaggacgaacgcgaggactacctgcgtcacgccccg
tggaagcccgaccgcgaaagcgatccggcaatgtccgccgaacgcttcgccgaattggcg
gaaaaggagcagttcatcctgacggtctgcgccaacggctatggcaagttgtcgtcggct
tatgaataccgccgcaccaaccgcggtggccagggcatcaccaacatcgacaacatagcc
cgcaatggcccggtggtcgcgagcttcgccgcttcgaaggacgatcagctgatgctcgtc
accgaccaggccaagctgattcgcctgccgctgatctcgctgcgggtgataggccgtggc
agcgccggcgtgcggctgttcaatgtgtccgacgaggaacacgtggtcagcgcggtgcgg
ctgatcgatgcggaccaaggcgaagaggcgggcgaagttccggcagccaccgggggcgaa
gactga
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