Novosphingobium sp. Gsoil 351: GKE62_02735
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Entry
GKE62_02735 CDS
T06443
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03420
Nucleotide excision repair
nog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKE62_02735
03430 Mismatch repair
GKE62_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_02735
Enzymes [BR:
nog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKE62_02735
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKE62_02735
MMR (mismatch excision repair)
Other MMR factors
GKE62_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGN53619
UniProt:
A0A6I5WT65
LinkDB
All DBs
Position
577911..580217
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AA seq
768 aa
AA seq
DB search
MADPAPSTAATVENPPQWLDGLNPPQQEAVLTTEGPVLMLAGAGTGKTAALTARLAHLVR
SRLAWPSEILCVTFTNKAAREMRERVGQLIGPAVEGMPWLGTFHSIAARMLRRHAELVGL
QANYTIIDTDDQIRLLKQLISANDLDEKRWPARQLAGLIDRWKNRGLNPGDLDAVENELY
ANGKGQQFYRLYQDRLKALNACDFGDLTLHMLNIFRRERDILEQYQQRFKYVMVDEYQDT
NAVQYLWLRLIAQARKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIRLEQNYRS
TPDILAAASGLIDANSQRLGKTLWTERNSGDKVRAIGVWDGPEEARRVGEEAEALIRDGV
SLNNMAILVRAQFQTREFEDRFIAIGLNYRIVGGFRFYERAEIRDALAYLRVIAQPADDL
AFERIFNTPKRGLGDKALETLHRTARGRGIPLAAAALEVCDSDELPTRARNSLAILMRGL
AHWREVAQTLVPAELVRTTLDESGYTGMLQAEKSADAAGRLENLTELARAMEEYETLGGF
LEHVSLVMDNDADADADKITIMTIHAAKGLEFDYLYLVGWEEGVFPSQRALDEGGLASLE
EERRLAYVAITRARLRCTIFHAANRRIYGQWTSSIPSRFIAEMPAAHVEHETTLSGGASL
WRAQFSENDDPFASVARNQPSRIMTRGPGWRRAVATGYDTTPKRIAEPGRSAASFAAKPR
TDIAIGMRVFHDKFGYGAVIDQEGNKLEIEFETAGRKRVIDSFVKVAD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccgctccctcgactgctgcaaccgtcgaaaatccgccgcaatggctcgat
gggctgaacccgccgcagcaggaggcggtgctcactaccgagggtccggtgctgatgttg
gccggggccggcaccggcaagaccgcggcactcaccgcgcgtctggcacacctcgtccgg
tcgcgtctcgcctggccgagcgaaattctgtgcgtcaccttcaccaacaaggccgcgcgc
gagatgcgcgagcgggtcggccagttgatcggtccggcggtggagggaatgccttggctt
ggcaccttccattcgatcgcggccaggatgctgcgccgccatgccgagctcgtcggcctc
caggcgaactacacgatcatcgacaccgatgaccagatccgcctgctcaagcaattgatc
agcgccaacgacctcgatgaaaagcgctggcccgcgcggcaattggcgggcctgatcgac
cgctggaagaaccgcgggctcaaccccggcgatcttgatgcggtcgagaacgagctctac
gccaacggcaagggccagcagttctaccggctctatcaagaccgtctgaaggcgctcaac
gcctgcgatttcggcgacctgacgctgcatatgctcaacatcttccgccgcgagcgcgac
attctcgaacagtaccagcagcgtttcaaatacgtgatggtcgatgagtatcaggacacc
aacgcggtccagtatctgtggctgcggctgattgcgcaggcgcgcaagaatatctgcgtg
gtcggcgacgatgaccagtcgatctattcgtggcgcggcgcggaagtcgccaacatcctg
cgcttcgaaaaggacttcccgggcgcgaaggtgatacgtcttgaacagaactatcgctct
accccggacattctcgccgccgcatccggcctgatcgatgcaaatagccagcggctgggc
aagacgctgtggaccgagcgcaattcgggcgacaaggtccgcgcgatcggggtgtgggac
ggccccgaggaagcgcgccgcgtgggcgaggaagccgaggcgctgatccgcgacggggtg
agcctcaacaatatggcgatcctcgtccgcgcccagttccagacccgtgagttcgaggac
cggttcatcgcgatcgggctgaactaccgcatcgtcggcggcttccgtttctacgagcgc
gccgaaattcgagatgcgctcgcttatctgcgggtcatcgcgcaacccgccgatgacctc
gcgttcgagcgcatcttcaacacccccaagcgcgggctgggcgacaaggctctggagacc
cttcatcgcaccgcgcgaggccggggcatcccgctcgcagccgccgcgctggaggtttgc
gattccgacgaactgccgacccgcgcgcgcaacagtctggcgatactgatgcgcggcctc
gcccactggcgcgaggtggcgcagacgctggtacccgccgaactggtccgcacgaccctc
gacgaaagcggctataccgggatgctccaggccgaaaaaagcgcggacgcggcggggcgg
ctcgagaacctgaccgagctcgcccgcgcgatggaggagtacgagacgcttggcgggttc
ctcgaacacgtcagcctggtcatggataacgacgccgacgccgacgccgacaagatcacg
atcatgacgatccacgccgccaaggggctggagttcgactacctctacctcgtcggctgg
gaagaaggcgtgttccccagccagcgcgcgctcgacgagggcgggctggccagcctcgaa
gaggagcgccgcctggcctacgtcgcgatcacccgcgcgcggctgcgctgcacgatcttt
cacgccgccaatcgccgcatctacggtcagtggaccagctcgatccccagccgattcatc
gccgaaatgcccgccgcgcatgtcgagcacgaaaccaccctgagtggcggcgcgtcgctg
tggcgcgcccagttcagcgagaacgacgatcccttcgccagcgtcgcccgtaaccagccg
tcgcgcatcatgacccgaggccccggctggcggcgcgcggtcgccaccggctatgacacg
acgcccaagcggatcgccgaacctggccgcagcgccgcgagcttcgccgccaagccgcgc
accgacatcgccatcgggatgcgcgtgttccacgacaagttcggctatggcgcggtgatc
gaccaggaagggaacaagctggagatcgagttcgaaaccgccgggcgcaagcgggtgatc
gacagcttcgtcaaagtggcggattag
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