Novosphingobium sp. Gsoil 351: GKE62_03740
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Entry
GKE62_03740 CDS
T06443
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03030
DNA replication
nog03430
Mismatch repair
nog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE62_03740 (dnaE)
03430 Mismatch repair
GKE62_03740 (dnaE)
03440 Homologous recombination
GKE62_03740 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nog03032
]
GKE62_03740 (dnaE)
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_03740 (dnaE)
Enzymes [BR:
nog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE62_03740 (dnaE)
DNA replication proteins [BR:
nog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE62_03740 (dnaE)
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE62_03740 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QGN53785
UniProt:
A0A6I5WSY4
LinkDB
All DBs
Position
complement(791558..795070)
Genome browser
AA seq
1170 aa
AA seq
DB search
MPFAPFVPLRVLSSYTLLEGAIDPKAIARLASERGFPAIAIADRNGLYGAVPFAAAAVEK
GVQPIVGCVLAVARPERGGAASGFGGPAAPTIDWLPLYAQDETGYVNLCHLVSRAHLDRP
LELPPHVSLADLVGRTEGLIALTGAGEGALARLLAEGQGEAAAVYAARLEELFPQRLYVE
IARRGDAIEDVAEDALIELAYARDLPLVATNPAAYDQPGFHAAHDAMLCIAASTHIAQED
RARSSSESWLKSGPMMAELFVDLPEALANTLVVAQRCAFAPPRRAPILPSLAGDQAGEAR
MLAGDARAGLAARLAPYGPMEAEARQVYADRLEFEIDVINRMGFAGYFLIVADFIKWAKE
NGIPVGPGRGSGAGSVVAWALTITDLDPLKLGLLFERFLNPERVSMPDFDIDFCETRRGE
VIRYVQAKYGHDHVAQIITFGKLKARAVLRDTGRILQMSYGQVDRLCKMVPNHPTDQWTL
PRTLNGVAEFRREYERDDEVRRLVDLAMQLEGLPRNSSTHAAGVVIGDRPLAQLIPLYRD
PRSDMPVTQFDMKHVEDAGLVKFDFLGLKTLSVLRKAVELLRKRGVEVDLDALSWDDPAV
YALLQRGDTVGVFQLESEGMRRTLNAVKPTAFGDIIALVSLYRPGPMDNIPLFGRRKNGL
EPIEYPHPKLAEILAETYGIFVYQEQVMQAAQVLAGYSLGDADLLRRAMGKKNQAEMDAQ
RQRFIDGCRDVSQIDTNKAGELFDLIDKFAGYGFNKSHAAAYALLSYQTAWLKAHYPEEF
YAASMCFDQHQSEKLAVFVDDLRRNGVVLAAPDINRSEAEFTVERTDDGYAVRYALAGIR
NVGEKAMEGVVGEREANGWFASLEDVFRRCPQGTMNRRLVEGLAAAGAFDGLEPNRAKVF
ANIDLLLSAADEAARSRSSGQAALFGGEDHNAPALRLADAEPWGRAEAMAKEREFFGFYF
AAHPVEQYRAVASANGALSHAALMAGSAGGDAQSGRRPAVMAALVEAVNRGRTKRGNDFI
RADFSDSSGQFSASCFEEALVESFQAWAKTGTCLLLNVELDSPSPEEPPRITVRSARPLA
EVKSAAKMLLQLEVSSPEAIAELALMLPRDPAGTGEVRARLRTAGGVAPLVTLGRDFHLD
SDLVERLIPIDGLANVALTTRGERKLRLVH
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgcccctttcgtcccgctgcgcgtcctttcgtcctacaccctgcttgaaggg
gctatcgatccgaaggcgatcgcgcggctggcgtccgagcgcggatttcccgcgatcgcg
atcgccgatcgcaacggtctgtacggggcggtgccatttgcggcggcggccgtagaaaag
ggggttcagccgatcgtcggatgcgtgctggcggtggcgcggcccgagcgaggcggagcg
gcgagcggctttggcggaccggcggcgccgacgatcgattggctaccgctctatgcccag
gacgagacggggtatgtcaatctttgccatctggtcagcagggcgcacctcgaccgcccg
ctcgaactgccccctcacgtttcgctcgccgacctcgtaggccgcaccgaaggtttgatc
gcgctgaccggggcgggcgagggggcgctcgcgcggctgctggccgaggggcagggcgag
gcggcggcggtctatgcggcgcggctggaggaactgttcccccagcggctctacgtcgaa
atcgcgcggcgcggcgacgcgatcgaagacgtcgccgaggatgcgctgatcgagctcgct
tatgcccgcgacctgccgctggtggccaccaatcccgccgcctacgaccagcccggcttt
cacgccgcccacgacgccatgctatgcatcgccgcgtcgacccacatcgcgcaagaggat
cgcgcgcggtcctcgtcggaatcctggctcaagtcgggacccatgatggccgaactgttc
gtcgatctccccgaggcgctggccaacacgctggtcgtcgcgcaacgctgcgccttcgcc
ccgccgcgccgcgcgccgatcctgcccagcttggcgggcgaccaggcgggcgaagcgcgg
atgctggccggggatgcacgcgccgggctcgccgcgcggttggcgccatacggccccatg
gaagccgaggcgcgacaggtctacgccgaccgcctcgaattcgagatcgacgttatcaac
cggatgggtttcgccgggtacttcctgatcgtcgccgattttatcaagtgggccaaggaa
aacggcatcccggtaggacccggacgcggttccggagcggggtcggtggtcgcctgggcg
ctgaccatcaccgatctagacccgctcaagctggggctgctcttcgaacggttcctcaac
ccggaacgggtgtcgatgcccgatttcgacatcgatttctgcgaaacccgccgcggcgag
gtgatccgctacgtccaggccaagtatggccacgatcacgtcgcccagattatcaccttc
ggcaaattgaaggcgcgcgcggtgctgcgcgacaccggtcgaatcctccagatgagctac
ggccaggtcgaccggctatgcaagatggtgcccaaccacccgaccgaccagtggacccta
ccgcgcacgctcaacggcgtcgccgagttccggcgcgaatacgagcgtgatgacgaggtt
cggcggctggtcgatctggcgatgcagctcgaaggcctgccgcgcaattccagcacccac
gccgccggggtagtgatcggcgaccgaccgctggctcaactcatcccgctctaccgcgat
ccgcgttcggatatgccggtcactcagttcgacatgaagcacgtcgaggatgccgggctg
gtcaagttcgatttcctggggctcaagacgctgtcggtgctgcgcaaggcggtcgagctg
ctgcgcaagcgcggggtcgaggtcgatctcgatgcgctgtcgtgggacgatccggcagtc
tacgcactgctccagcggggtgatacggtgggggtgttccagctcgaatccgaagggatg
cggcgcacgctcaacgcggtcaagccgaccgcgttcggcgacatcatcgcgctggtctcg
ctctatcgtcccggcccgatggacaacatcccgttgttcgggcggcgcaagaacgggctc
gagccgatcgagtatccgcaccccaagctcgccgaaatcctcgccgagacgtatggcatc
ttcgtctaccaagaacaggtgatgcaggccgcgcaggtgctggcgggttattcgctgggc
gacgccgacctgctgcgccgggcgatgggcaagaagaatcaggccgaaatggacgctcag
cgccagcgcttcatcgacggctgccgcgacgtttcgcagatcgatacaaataaggcaggc
gaactgttcgacttgatcgataagttcgccgggtacggcttcaacaagagtcacgctgca
gcctacgcactgctgtcgtatcaaaccgcgtggctgaaagcgcactatcctgaggaattc
tacgccgcctcgatgtgcttcgaccagcatcagtcggaaaagctggcggtgttcgtagac
gatctgcggaggaatggcgtggtgctggccgcgcccgacatcaaccgttccgaagctgaa
ttcacggtcgagcgcaccgatgacggctatgcggtgcgctatgctctggcgggcatccgc
aacgtcggcgaaaaggcgatggagggcgttgtcggtgagcgcgaggcgaacggctggttc
gccagcctggaggacgtgttccgccgctgtccgcagggcaccatgaaccggcggctggtc
gagggtctggcagctgcgggggcattcgacggcctggaacccaatcgcgccaaggtcttt
gcaaacatcgatctgctgctgtcggccgccgacgaggccgcgcgcagccgcagcagcggg
caggcggccttgttcgggggagaggaccacaacgcgcccgctttgcgcctggccgacgcc
gagccgtgggggcgggccgaagccatggccaaggagcgcgaattcttcgggttctacttc
gccgcgcacccggtcgagcagtaccgcgcagtcgcctccgccaacggtgcgctgagccat
gccgcgctgatggccggcagcgcgggcggcgatgctcagtccggccgccgcccggcggtg
atggcggcgctggtcgaagcggtgaaccggggacggacgaagaggggcaacgatttcatc
cgcgccgacttttcggacagcagcgggcagttttccgcaagctgcttcgaagaagcgctg
gtcgagagcttccaggcctgggccaagaccggcacttgtctgctgctcaacgtcgagctc
gacagccccagccctgaagaaccgccgcggatcacagtccgctcggcgcgtccgctggcg
gaggtcaagagtgcggccaagatgctgctgcaattggaagtttcctcgcccgaggctatc
gccgagcttgccctgatgcttcctcgcgacccagcgggtacgggcgaagttcgcgcgcgt
ttgcgcaccgcgggcggggtggccccgcttgtgacgcttggccgcgacttccatctcgac
tccgatctcgtggaacggttgatcccgatcgatggacttgccaatgtcgcgctgacgacg
cgcggtgaaaggaagctgcggctggtccactag
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