Novosphingobium sp. Gsoil 351: GKE62_03800
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Entry
GKE62_03800 CDS
T06443
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKE62_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nog03019
]
GKE62_03800
Messenger RNA biogenesis [BR:
nog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GKE62_03800
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QGN53795
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Position
807948..808724
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AA seq
258 aa
AA seq
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MLWRGAGQYPRLSDPWRPRQDAADGAGHRLARSDPRQWPGLWRAAHPRGFGRGVPRNEGL
DPRLHHAAQGVAVGAGGYAAHLRGDAADAGERVSVDLAALPYRPCVGIMLVNGEGKVFVG
QRIDAPKGSRGEGDRWQMPQGGIDDGEDLHVAAFRELGEETGVGEHHATIIAQTREELLY
DLPDDLLGKLWGGKYRGQRQHWVLMRFTGEDADVRLDAHDPPEFFEWKWLEPELLPELIV
PFKRRVYRAVLEEFAGLI
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgctatggcgcggtgccgggcaatacccgcgcctatccgatccatggcgaccacgccaa
gatgccgccgacggtgctggtcaccgcctcgctcgatccgatccgcgacagtggccgggt
ctatggcgcgcagctcatcctcgcgggttcggacgtggtgttcctcgaaatgaagggctc
gatccacggcttcaccacgctgcgcaaggcgttgccgtcggcgcaggcggatatgcagcg
catcttcgcggcgatgcggctgatgctggggaacgcgtgagcgtcgatctcgcggccctc
ccctatcgcccttgcgtgggaatcatgctggtcaacggcgaaggcaaggtcttcgtcggc
cagcggatcgacgccccaaaaggctcgaggggggaaggtgatcgctggcagatgccgcag
ggcgggatcgacgacggcgaagacctccacgtcgcggcgttccgcgagctgggcgaggaa
accggggtcggcgagcatcacgccacgatcatcgcccagacgcgcgaggaattgctctac
gacctgcccgacgatctcctcggcaagctgtggggcggcaagtaccgcggccagcgccag
cactgggtgctgatgcgcttcaccggcgaggacgccgacgtgcggctggatgcgcacgat
ccacccgaattcttcgaatggaaatggctcgagccggagctgctgcccgagctgatcgtt
ccgttcaaacgccgcgtctatcgcgccgtgctggaggagttcgcggggttgatttga
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