Novosphingobium sp. Gsoil 351: GKE62_04370
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Entry
GKE62_04370 CDS
T06443
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog00220
Arginine biosynthesis
nog00240
Pyrimidine metabolism
nog00250
Alanine, aspartate and glutamate metabolism
nog01100
Metabolic pathways
nog01110
Biosynthesis of secondary metabolites
nog01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GKE62_04370 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GKE62_04370 (carB)
00220 Arginine biosynthesis
GKE62_04370 (carB)
Enzymes [BR:
nog01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GKE62_04370 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
RimK
ATP-grasp_5
CoA_binding_2
MucBP_2
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QGN53880
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All DBs
Position
complement(920822..924145)
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AA seq
1107 aa
AA seq
DB search
MPKRTDISSILVIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPEF
ADATYVEPITPEVVARIIEKERPDAVLPTMGGQTALNTALALFNDGTLAKYGCIMIGADA
EAIDKAEDRQKFRQAMDRIGLESARSGIAHSEAEALAVLERTGLPAVIRPSFTLGGTGGG
IAYNREEFLHIVRTGIDASPTDEVLIEESLLGWKEFEMEVVRDRKDNAIIVCSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPVDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPAAFEPTIDYVVTKIPR
FAFEKFKGAEALLGTAMKSVGEVMAIGRNFQESVQKALRGLETGLDGFNRVVELEGADRE
EIVAALARPTPDRLLVAAQAFREGLSVEDIHAITKYDPWFLRQIEAIVAAEIAIQRDGLP
NGPVALRKLKAMGFSDKRLATLAVRAVGVAGGLGETQAKRSGLLHDALKAMAGATSEAEV
CELRHKLGVHPVFKRIDSCAAEFQAVTPYMYSTYEAPLFGEPENESQPSERRKIVILGGG
PNRIGQGIEFDYCCVHACFALAEAGFETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLE
ILRLEQSKGELVGVIVQFGGQTPLKLAQALEDAGIPILGTSPDMIDLAEDRERFAKLVTR
LKLKQPENGIARSRDEAVAVAARIGYPVLIRPSYVLGGRAMEIVDSQAQLDDYIATAVHV
SGDSPVLIDKYLRDAIECDVDALADGDEVVVAGVMQHIEEAGIHSGDSACTLPPYSLPPE
IVAEMERQAILLAKALDVRGLMNIQFAVKGDEVYLIEVNPRASRTVPFVAKAIGQPIAKF
AARIMAGEKLRDLPTIVRDVPYMAVKEAVFPFARFPGVDPVLSPEMKSTGEVMGIDRTFA
MAFAKAQLGAGNRLPTGGAVFVSVKDGDKPVILPAVRKLEALGFTIVATGGTARYLTQHG
VAVERINKVAEGRPHIVDRIKDGAIALVFNTTEGWQSLKDSQSIRGSTLTGRLPYFTTAA
ASVAAAEAIEALRTAQLEVRSLQDYYG
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatttcctcgattctcgtcattggcgccgggccgatcgtcatc
ggtcaggcttgcgagttcgattattcgggcacgcaggcgatcaaggcgctcaaggaagag
ggctatcgcatcgtcctggtcaattcgaacccggcgacgatcatgaccgatcccgagttc
gccgacgcgacttatgtcgagccgatcacgcccgaggttgtcgcgcggatcatcgagaag
gagcggcccgacgcggtgctgccgacgatgggtgggcagaccgcgctcaacaccgcgctc
gcgctgttcaacgatggcacgctggccaagtacggctgcatcatgatcggtgcggacgca
gaggcgatcgacaaggccgaggatcggcagaagttccgccaggcgatggaccggatcgga
ctcgaatccgcgcgctcggggatcgcgcattcggaggccgaggcgctcgccgtgctcgaa
cgcaccgggctgcctgccgtcatccgccccagcttcacgctgggcgggaccggcggcgga
atcgcgtataatcgcgaggaattcctccacatcgtccgcaccgggatcgacgcctcgccg
accgacgaggtgctgatcgaggaatcgctgctcggctggaaagagttcgagatggaggtg
gtgcgcgatcgcaaggacaacgcaatcatcgtctgctcgatcgagaacgtcgatccgatg
ggggtgcatacgggagattcgatcaccgtcgcccccgcgctgacgctgaccgacaaggaa
taccagatcatgcgcaacgccagcatcgcggtgctgcgcgagatcggggtcgagaccggc
gggtccaacgtccaattcgcggtcaacccggtggacggccggctgatcgtgatcgagatg
aatccgcgcgtctcgcgctcgtcggcgctggcgtctaaggccaccggcttccccatcgcc
aaggtcgcggccaagctggcggtcggctacaccctcgacgagatcaccaacgacatcacc
ggcgcgaccccggcggctttcgagccgacgatcgactatgtcgtgaccaagatcccgcgc
ttcgcgttcgagaagttcaagggcgccgaggcgctgctcggcaccgcgatgaaatcggtc
ggcgaggtcatggcgatcggccgcaatttccaggaatcggtgcagaaggcgttgcgcggg
ctggagaccggattggatggcttcaaccgcgtggtcgagctggaaggcgccgaccgcgag
gagatcgtcgccgcgctcgcccgcccgacgcccgatcgcctgctcgtcgccgcgcaagcc
ttccgcgaggggctgagcgtggaggacatccacgcgatcaccaagtacgacccgtggttc
ctgcgccagatcgaggccatcgtcgccgccgaaatcgcgatccagcgcgacggcctgccc
aacggcccggtggcgctgcgcaagctgaaggcgatgggcttttccgacaagcgcctcgcc
acgctggcggtgcgcgcggtcggcgtcgccggcgggctgggcgaaacccaggccaagcgt
tcgggcctgctccacgatgcgctgaaggcgatggccggggcgacaagcgaggccgaggtg
tgcgaactgcgccacaagctgggcgtccacccggtgttcaagcgcatcgacagctgcgcg
gcggaattccaggcggtcacgccctatatgtactcgacctacgaggcgcccctcttcggc
gaaccggaaaacgagtcgcaaccgagcgagcgccgcaagatcgtgatcctgggcggcgga
cccaaccgcattggccaggggatcgagttcgactattgctgcgtccacgcctgcttcgcg
ctcgctgaagccgggttcgagacgatcatggtcaactgcaacccggagacggtcagcacc
gactacgacacctccgaccggctctatttcgagccgctgaccgccgaggacgtgctcgaa
atccttcggctggagcaatcgaagggcgagctggtcggggtgatcgtccagttcggcggg
cagaccccgctgaagctggcgcaggcgctcgaggatgcggggattccgatcctcggcacc
tcgcccgacatgatcgacctggcggaggaccgcgaacgcttcgccaagctggtcacccgg
ctcaagctcaagcagcccgagaacggcatcgcccgcagccgggacgaggcggtcgcggtg
gcggcgcggatcggctatccagtgctgatccggccgagctacgtgctcggcgggcgggcg
atggagatcgtcgacagccaggcccagctcgacgactacatcgccaccgcggttcacgtt
tcgggcgattcgccggtgctgatcgacaagtacctgcgcgatgcgatcgaatgcgacgtc
gatgccctggccgatggcgacgaggtcgtggtcgcgggcgtgatgcagcacatcgaggaa
gccgggatccactcgggcgacagcgcctgcaccctgccgccctacagcctgccgcccgag
attgtcgccgagatggagcgccaggcgatcctgctggccaaggcgctcgacgtgcgcggg
ctgatgaacatccagttcgcggtgaagggcgacgaagtctacctgatcgaggtcaacccg
cgcgccagccggacggtgccgttcgtggccaaggcgatcggccagccgatcgccaagttc
gcggcgcggatcatggccggcgagaagctgcgcgacctgccgacgatcgtccgcgacgtg
ccctacatggcggtcaaggaagcggtgttcccgttcgcgcggttccccggggtcgatccg
gtgctcagcccggagatgaagtcgaccggcgaggtgatggggatcgaccgcactttcgca
atggctttcgccaaggcgcagctcggcgcaggcaaccgcctgccgaccggcggcgcggtg
ttcgtctcggtcaaggacggcgacaagccggtgattctgcccgcggtgcgcaagctggag
gcgctgggctttaccatcgtcgcaaccggcggcaccgcgcgctacctgacccagcacggc
gtcgcggtcgaacggatcaacaaggtcgccgagggccgcccgcacatcgtcgaccggatc
aaggacggcgcgatcgcgctggtgttcaacaccaccgaaggctggcagagcttgaaggac
tcgcaatcgatccgtggatcgacgctgaccgggcgcctgccctacttcaccaccgcggcg
gccagcgtcgccgcggccgaggcgatcgaggctttgcggacggcccagcttgaagtgcgc
tcgcttcaagactactatggctga
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