KEGG   Novosphingobium sp. Gsoil 351: GKE62_05630
Entry
GKE62_05630       CDS       T06443                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
nog  Novosphingobium sp. Gsoil 351
Pathway
nog02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nog00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GKE62_05630 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nog02044]
    GKE62_05630 (trbB)
Enzymes [BR:nog01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     GKE62_05630 (trbB)
Secretion system [BR:nog02044]
 Type IV secretion system
  Trb secretion system protein
   GKE62_05630 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin nSTAND3 TrwB_AAD_bind Dynamin_N DEAD AAA_16 CbiA AAA_28 ABC_tran MobB GTP_EFTU FtsK_SpoIIIE AAA_22 IstB_IS21 AAA_19 MMR_HSR1 ATPase KTI12 CLP1_P ResIII
Other DBs
NCBI-ProteinID: QGN54101
LinkDB
Position
1179893..1180882
AA seq 329 aa
MSEPLALERRRAMLRTALGPAIEAAFADSAVIEIMVNPDGALRLDRLGEGVVDTGVRLEP
AQIERIIRLVAAHARSEVHAGAPIVSAELPAHGRGTGERFEGILPPVASAPCFAIRKPAT
RIHTLADYVADGIMTAHAAGVLAAAVRDRRNIVVAGGTSSGKTTLANALLGEMAGRDERV
ILIEDTRELQSPAADTVALRARMGAATIAELVRSTLRLRPDRIVVGEVRGPEALDLLKAW
NTGHPGGIATVHANSAAAVLTRLEQLVQEATLAVPRALIAEAVELVVFLAGRGAARRVET
IAEVAGLDAAGAYRLRALPLEPHPPGEHR
NT seq 990 nt   +upstreamnt  +downstreamnt
atgagcgagccgcttgccctcgagcgccgccgcgcgatgctcaggaccgcgcttggtccg
gcgatcgaagccgcgttcgccgacagcgccgtgatcgagatcatggtcaatcccgacggc
gcgctgcgcctcgaccggctcggcgaaggcgtggtcgacaccggcgtgcgcctcgaaccc
gcccagatcgagcgtatcatccgcctggtcgccgcccacgcgcgtagcgaggtccatgcc
ggcgcaccgatcgtctcggccgagttgcccgcccatgggcgcggtacgggcgagcgcttc
gagggcatcttgcccccggtcgcgagcgcgccgtgctttgccatccgcaagcccgcgacc
cgcatccacacgctggccgactatgtcgccgacggcatcatgaccgcgcacgccgcgggc
gtgctcgccgccgcggtccgcgatcgccgcaatatcgtggtcgccggcgggacgagttcg
ggcaagacgacgctcgccaatgcgctgctcggcgagatggcagggcgcgacgagcgggtg
atcctgatcgaggacacccgcgagcttcagtcgcccgccgccgacacggtcgcgctgcgc
gcgcggatgggcgcggcgacgatcgccgaactggtgcgctcgacgctgcgactgcgtccc
gaccggatcgtggtcggcgaagtccgcggccccgaggcgctcgacctgctcaaggcatgg
aacaccggccatcccggcgggatcgcgacggttcacgccaacagcgcggccgcggtgctg
acccggctcgagcaactcgtccaggaggcgactctcgccgtaccgcgcgcgctgatcgcc
gaagccgtcgagctggtcgtgttcctggccggccgcggcgcagcgcgccgcgtcgaaacc
atcgccgaagtcgcggggctcgacgcagccggagcctaccgcctgcgcgccctgccgctc
gaaccccacccaccaggagaacaccgatga

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