KEGG   Novosphingobium sp. Gsoil 351: GKE62_06245
Entry
GKE62_06245       CDS       T06443                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
nog  Novosphingobium sp. Gsoil 351
Pathway
nog00061  Fatty acid biosynthesis
nog00071  Fatty acid degradation
nog01100  Metabolic pathways
nog01212  Fatty acid metabolism
nog02024  Quorum sensing
nog04146  Peroxisome
Module
nog_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:nog00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GKE62_06245
   00071 Fatty acid degradation
    GKE62_06245
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GKE62_06245
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GKE62_06245
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:nog01004]
    GKE62_06245
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nog04147]
    GKE62_06245
Enzymes [BR:nog01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GKE62_06245
Lipid biosynthesis proteins [BR:nog01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GKE62_06245
Exosome [BR:nog04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GKE62_06245
  Exosomal proteins of breast cancer cells
   GKE62_06245
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: QGN54206
LinkDB
Position
1311708..1313204
AA seq 498 aa
MTTVRRISDALKTRAVHQSDEIAHDDTRRQLTFAAWDREADEIGGGLAKAGLLPGDRVFL
PISNVHAVEMAIAVFAIFRAGGIACPINTRLSRREINDYAELTTPKWCMTDTPEAVAGLE
FSRCWTVDAMPRDFSALPDQASLDPNADAEILGTSGTTGKIKGVVVTHPDLMKGVTGTNM
DRSRSTLNALPLTGSGGNLGIVMLPAKGGATAITQPKFDPKGFLDLVRDRRPNLVYLVPS
MLRLLLDHPDVAAYDFAGVRYLMTGTAPLPHDSVKRAMKLWPHLRIRNTYGMSEGGVGIG
TSSQAQVLKAGCVGKLPDHMQIRAEDGKVIREAGIVGEIFGFQKHPRRYWNDPEATAASF
AGGWTRTGDLGYVDEDGDLIMSGRSKELIIRGGYNITPLEIETVLHLHPAVQQAAVVGIP
HDVLGEDIAAAVTLRPGETACDVEIVAFCREHLADNKIPRTLLVLEQMPLNPNGKIVKKE
LAPLLEEAARVARAKRVA
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaccacggtaaggcgcatcagcgacgctttgaagacgcgcgctgtgcatcagagcgat
gagatagcgcacgatgacactcgtcggcagctaacttttgccgcatgggaccgcgaagcg
gacgaaatcggaggtgggcttgcaaaagcgggtttgctgcccggcgaccgggtgttcctc
ccgatcagcaatgttcacgcggtggaaatggcgatcgcggtttttgcgatcttccgcgcg
ggtgggatagcatgccccatcaatacccgcctgagtcgccgcgagatcaacgattacgca
gaactcactacacccaaatggtgtatgaccgacacgccggaagcggttgctgggctagag
ttttcaaggtgttggactgtcgatgcgatgccgcgcgatttttctgcgctgccggaccag
gcaagtctcgatccgaatgctgacgcggaaattttgggcaccagcggaaccacaggcaaa
atcaagggcgtcgtcgtaacccatcccgacttgatgaagggcgtcaccggcaccaacatg
gaccgctcccgttcaaccttgaacgcgttgccgctaaccggttccgggggcaacctaggc
attgttatgctgcccgcaaagggcggcgcgactgcaattacccagcccaagttcgacccg
aagggcttcctcgacctggtgcgggataggcgccccaatctcgtttacctggtgccctcg
atgctgcgcctgttgctagatcatcctgacgtcgcagcttacgactttgccggggtgcgc
tacctgatgaccggcaccgcgccactaccgcacgattcggtaaagcgtgccatgaagcta
tggccgcaccttcggatccggaatacttacggcatgtccgagggcggtgtcgggatcggc
acttcaagccaggcacaggtgctcaaggccggctgcgtgggcaaactgccggatcatatg
cagatccgagccgaagacggcaaagtgatccgggaggctgggatcgtcggagagattttc
ggatttcaaaagcacccgcgccgctactggaacgatccggaggccaccgcagccagcttt
gccgggggttggactaggacgggcgacctcggctacgtcgacgaggacggcgacctgatc
atgtcgggccgctcgaaggaactgataattcgcggcgggtacaacatcactccgctcgaa
atcgagacggtgctacacctccaccctgcggtgcagcaggccgcggtggtgggtatcccg
cacgatgtcctgggggaggatatcgcggccgccgtgacgctgcgtcccggcgagactgcc
tgcgatgttgagatcgtcgcattctgccgagagcatcttgccgacaacaagatcccgaga
accctgctggtgctcgaacagatgccgctcaatcccaacggcaagatcgtcaaaaaggaa
cttgccccgctactcgaagaggctgcgagagtggctcgggcgaaacgggtcgcatag

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