Novosphingobium sp. Gsoil 351: GKE62_09820
Help
Entry
GKE62_09820 CDS
T06443
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKE62_09820 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_09820 (mutM)
Enzymes [BR:
nog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GKE62_09820 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GKE62_09820 (mutM)
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKE62_09820 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QGN54805
UniProt:
A0A6I5WVN8
LinkDB
All DBs
Position
complement(2035240..2036049)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETTVRGLERILDGRRIARVAVNRADLRRPFPPELVQTLTGATVLGLARRAKYG
LIHTDRAATLVFHLGMSGRWRIDPEAIAKHDHMVLETEDHVLALCDPRRFGSVDLVDTAR
LDEWPPFAALGPEPLGPGLTAKHLKRAFGSRIAAVKLLLLDQRIVAGLGNIYVCEALFRA
RIDPRKAAGKVPLVALERLVPAIQMVLAESIEAGGSSLRDYAQPSGQLGYFAKQFDVYGR
EGEPCGCGGTVKRIVQGGRSTWFCPKCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaagtcgaaaccaccgtgcgcgggctggagcgcatcctcgacgga
cggcggatcgcgcgagtcgcggtcaatcgcgccgacttgcgccgcccgttcccgcccgaa
ctcgtccagacgctgaccggagcgaccgtcctcgggctagcgcggcgcgccaagtacggc
ctgatccataccgaccgcgcggccacgctggtgttccatctcggcatgagcggacgctgg
cggatcgatcccgaggcgatcgccaagcacgatcatatggtgctcgaaaccgaggaccac
gttctcgcactgtgtgatccgcggcggttcggctcggtcgacctggtcgataccgcgcgc
ctcgacgaatggccgccgttcgccgcgctcggccccgagccgctggggccggggttgacc
gccaaacacctcaagcgcgcgtttggaagccggatcgccgcggtgaaactcctgctgctc
gatcagcggatcgttgccgggctcggcaacatctacgtctgcgaggcgctgtttcgcgcg
cgaatcgatccgcgcaaggcggcgggaaaggtcccattggtcgcactcgagcgcctcgtc
cccgcgattcaaatggtcctcgccgaatcgatcgaggcggggggatcgtcgctgcgcgat
tatgcccagccctcggggcagctgggctatttcgccaagcagttcgatgtctatggccgc
gagggcgagccgtgcgggtgtggtggaacggtcaagcggatcgttcaggggggacgtagc
acgtggttctgcccgaagtgccagaagtaa
DBGET
integrated database retrieval system
