Novosphingobium sp. Gsoil 351: GKE62_10295
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Entry
GKE62_10295 CDS
T06443
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03030
DNA replication
nog03430
Mismatch repair
nog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE62_10295 (dnaQ)
03430 Mismatch repair
GKE62_10295 (dnaQ)
03440 Homologous recombination
GKE62_10295 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nog03032
]
GKE62_10295 (dnaQ)
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_10295 (dnaQ)
Enzymes [BR:
nog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE62_10295 (dnaQ)
DNA replication proteins [BR:
nog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE62_10295 (dnaQ)
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE62_10295 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QGN54881
LinkDB
All DBs
Position
complement(2125292..2125981)
Genome browser
AA seq
229 aa
AA seq
DB search
MREIIFDTETTGLDPQGGDRLVEIGCIEMINRVPTGRTYHAYFNPGRSMPAGAEAVHGLS
DVFLSDKPPFPEKAAELIEFLGDAKLVAHNAGFDFGFLNMELSLCAMDPVCRTRMIDTVA
LAKVRHPGAKLSLDALCSRYGIDRSHRVKHGALLDAELLAQLYVELTGGRQIGLGLVAEA
AANDASSSAITQRQRVFRAPRPHTASEGELARHAAFVATLAAPLWLSAR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcatcttcgataccgaaaccaccgggctcgatccgcaaggcggggaccgg
ctggtcgagatcggctgcatcgaaatgatcaatcgggttccgaccgggcgcacctatcat
gcctatttcaacccgggccgttcgatgcccgcgggggccgaggcggtccacgggctttcc
gatgtgtttctctcggacaagccgccgttccccgaaaaggcggccgagctgatcgaattc
ctcggcgacgccaagctcgtcgcgcacaacgccgggttcgatttcggtttcctcaacatg
gaactcagcctgtgcgcgatggacccggtctgccgtacccggatgatcgacaccgtcgcg
ctggccaaggtccgccatcctggcgccaagctgagcctcgacgcgctgtgcagccgctat
gggatcgatcgcagccaccgggtcaagcacggcgcgctgctcgatgccgagctgctcgcg
cagctctacgtcgagctgaccggagggcgtcagatcgggctgggactggtggccgaggct
gccgccaacgacgcttcgagttcggccatcacccagcgccagcgcgtgttccgcgcaccg
cgtccgcataccgcgagcgagggcgaactcgcccgccatgccgctttcgtcgccacgctt
gccgcgccgttatggctctcggcgcgttga
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