Novosphingobium sp. Gsoil 351: GKE62_11450
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Entry
GKE62_11450 CDS
T06443
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03030
DNA replication
nog03430
Mismatch repair
nog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE62_11450
03430 Mismatch repair
GKE62_11450
03440 Homologous recombination
GKE62_11450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nog03032
]
GKE62_11450
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_11450
Enzymes [BR:
nog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE62_11450
DNA replication proteins [BR:
nog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE62_11450
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE62_11450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4358
Motif
Other DBs
NCBI-ProteinID:
QGN55076
LinkDB
All DBs
Position
2375009..2376049
Genome browser
AA seq
346 aa
AA seq
DB search
MKATQANFAATAARAARECRTFYFCGPDEAGAHDAAQAIVALLPAGIERVELAGADLRKD
PVLLSDEARSTSLFGGARYIFVRTAGDETSEAVENLLADEVEACPVLIVATSATDKSRVA
KLLAERKDALVAMFYAPDLPAVAQAVRTMADSAGVRIDGALAERIAKACALDTRMARSEI
EKLALYLDAGPQAPRTADAEALDAIGAKNEDDGFMPIVNCVLGGDVGRLSAELTRLRELS
LNPVGLLLAFERRAAQLAQLAARMGPRGDVQRFMESERQARRVFFRDAPDLTNQLRRWRG
KRLTRLVERLVALHRELMANSQSAGLLLAQGLTEIARAAAAVERVR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccacccaggccaacttcgccgccaccgccgcgcgggccgcgcgcgaatgccgg
accttctatttctgcggacccgacgaggcgggcgctcacgatgccgcacaggcgatcgtc
gcgctgctgccagccgggatcgagcgggtcgaacttgccggggcggatctgcgcaaggac
ccggtgctgctctcggacgaggcgcgctctacttccttgttcggcggtgcgcgctacatt
ttcgtccgcaccgcgggcgacgagaccagcgaggcggtggagaacctcctggccgacgaa
gtcgaggcctgcccggtgctgatcgtggctacctcggcgaccgataagagccgcgtggcc
aagctgctggccgagcgcaaggatgcgctggtggcgatgttctacgctcccgacctgccc
gcggtggcgcaggcggtgcgcacgatggccgattcggcgggggtgcggatcgatggcgcc
ttggcggaacggatcgccaaggcctgtgcgctcgacacgcggatggcgcgcagcgagatc
gaaaagcttgcgttgtatctcgacgccgggccgcaggcgccaaggaccgccgatgccgag
gcgctcgacgcgatcggggcgaagaacgaggacgacggattcatgccgatcgtcaattgc
gtgctcggcggcgatgtcgggcgcctgtcggccgagctgacgcggctgcgcgagctgtcg
ctgaatccggtgggtctgctcctggcgttcgagcgacgggcggcgcagctcgcccagctt
gcggcgcggatggggccgcgcggcgatgtccagcgcttcatggagagcgaacgccaggcg
cgccgggtgttcttccgcgacgcgcccgatctcaccaaccagctgcgccgctggcgcggc
aagcggttgacccggctggtcgaacggctcgtggcgctacatcgcgaacttatggccaac
agccagagcgccgggttgctgctagcccagggcctaaccgaaatcgcccgggcggcggcc
gccgtggagcgggtccggtag
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