Novosphingobium sp. Gsoil 351: GKE62_11920
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Entry
GKE62_11920 CDS
T06443
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nog
Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nog01002
]
GKE62_11920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nog01011
]
GKE62_11920
Peptidases and inhibitors [BR:
nog01002
]
Cysteine peptidases
Family C82
GKE62_11920
Peptidoglycan biosynthesis and degradation proteins [BR:
nog01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GKE62_11920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QGN55150
UniProt:
A0A6I5WUZ0
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All DBs
Position
2465010..2466359
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AA seq
449 aa
AA seq
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MQFRGAFQRTTILAAMAGLALPGAAFAQPSAAPVPPPADLLPPAAATPAPTPAPTPVPPP
PAPSWPLRDARALLATIQGIGSEGLDPKDYEPATLAAAIAAGEGVALNDTATRLFAWLVE
DMRDGRTPMAARVQWFAVDPDRDINPTALVLARALEQHDVPGQIAALAPLHPDYAQLKRS
LAEGTGDKAVIRANMDRWRWLARDMGKQYLLTNVPEYTLRLTVNNRVITSYRTVVGKPGK
TATPQLAETVQGVIFNPTWTVPQSIVKGEGLGAKVLANPGWAKAAGYKGIKDPTTGFVTV
VQQPGKNNSLGLMKLDMPNPHAIFVHDTPAKSLFAAPNRAFSHGCIRTERASELGMLMAM
LGGGLTKEEGVAHTLSGVYTKVPMTKTFPIYITYFTMASDVGGGMRKFADIYGRDAPVLA
SFKAPRQLHTDQRTSSEKVIEIVDDLGAV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccggggtgcctttcaacgaaccacgattctcgcggcaatggccgggctggcg
ctgccgggggccgcgttcgcccagccgtcggccgcgccggttcccccgcctgcggacctg
ttgccgcccgcggcagcgacgcccgcacccacgcccgctcccaccccggtgcccccgccg
cctgcaccctcgtggccgctgcgcgatgcgcgtgccctgctggcgaccatccaggggatc
ggcagcgaaggcctcgatcccaaggactacgaacccgccacgctcgccgccgcgattgcc
gccggcgagggagttgcgctcaacgataccgccacccggctgttcgcttggctggtcgag
gacatgcgcgacggccgcacgccgatggcggcgcgggtccaatggttcgcggtcgatccc
gatcgcgacatcaacccgaccgcgcttgtcctggcgcgcgcgctggagcagcacgacgtc
cccgggcagatcgccgcgctcgccccgctccaccccgactatgcccagctcaaacggtca
ttggccgagggaacgggcgacaaggccgtgatccgcgccaacatggaccgctggcgttgg
ctggcccgcgacatgggcaagcagtacctgctgaccaacgtgcccgaatacacgctgcgg
ctgacggtcaacaaccgcgtcatcaccagctaccgcacggtggtcggcaagccgggcaag
acggcgacgccgcagctcgccgagaccgtgcaaggggtgatcttcaacccgacgtggacg
gtgccgcagtccatcgtcaaaggcgaggggctgggcgccaaggtgctcgccaatccgggc
tgggccaaggccgcgggctacaaggggataaaggatcccacgaccggcttcgtcaccgtc
gtccagcagccgggcaagaacaactcgctcgggctgatgaaactcgacatgcccaacccg
catgcgatcttcgtccacgataccccggccaagtcgctgttcgccgcgcccaaccgcgcg
ttcagtcatggctgcatccgcaccgagcgcgcgagcgagctggggatgctgatggcgatg
ctcggcggcggtctgaccaaggaagagggcgtcgcccacaccctgtcgggcgtctacacc
aaggtccccatgaccaagaccttcccgatctacatcacctatttcaccatggcgagcgac
gtcggcgggggcatgcgcaagttcgccgacatctatggccgcgacgcgccggtgctggcc
agcttcaaggccccgcgccagctccacaccgaccagcgcaccagcagcgagaaggtgatc
gagatcgtggacgatctgggggcggtttga
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