Novosphingobium sp. Gsoil 351: GKE62_13245
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Entry
GKE62_13245 CDS
T06443
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nog
Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nog03032
]
GKE62_13245
03036 Chromosome and associated proteins [BR:
nog03036
]
GKE62_13245
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_13245
DNA replication proteins [BR:
nog03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GKE62_13245
Chromosome and associated proteins [BR:
nog03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GKE62_13245
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GKE62_13245
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ClpB_D2-small
Motif
Other DBs
NCBI-ProteinID:
QGN55368
LinkDB
All DBs
Position
2749120..2749401
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELLQALAKENSGLRADEIERVADVFFDEIAQRLADNGRVELRGFGAFSTRERDSRR
GRNPRTGEAVDVPAKRVPYFKPGKEMRARLNTD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtccgaactgctgcaggcgttggccaaggaaaattccggattgcgcgccgac
gagatcgagcgcgtcgccgacgtgtttttcgacgagatcgcgcagcgtttggctgacaac
ggccgggtcgaactgcgcgggttcggcgcgttctccacccgcgagcgcgattcgcgccgc
ggccgcaacccgcgcaccggggaagctgtcgacgtgcccgccaagcgcgtcccctacttc
aagcccggcaaggaaatgcgcgcacgcctgaacacggactga
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