Novosphingobium sp. Gsoil 351: GKE62_13590
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Entry
GKE62_13590 CDS
T06443
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nog
Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nog03016
]
GKE62_13590 (truB)
Enzymes [BR:
nog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GKE62_13590 (truB)
Transfer RNA biogenesis [BR:
nog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GKE62_13590 (truB)
Prokaryotic type
GKE62_13590 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QGN55426
UniProt:
A0A6I5X353
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All DBs
Position
2816781..2817737
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AA seq
318 aa
AA seq
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MTQPNGWLILDKPVGLGSTQAVGAVKRNLREAGYGKVKTGHGGTLDPLASGVLPIALGEA
TKLAGRMLDGDKVYEFTVHFGAETDTLDLEGTVVAQSDIRPTLAAVDAVMARFTGAIEQV
PPAFSALMVEGRRAYDLARAGEEVALPARAVTIHSLTAGVERSRDTGAGTSTSLDTSGYL
SCLSLTAHVSKGTYIRSLARDFARALGTVGHVTYLRRIRAGPFGLDAAISLDMLEEIGKG
ARLENSLLPLEAGLDGIPALDLGPEQARAVHQGRVLTGLAFQDGVCWARYGDRPLALLQV
AGGNATVLRGFNLPDTAE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagcccaacggctggctgatcctcgacaagccggtgggcctcggctcgactcag
gcggtcggcgcggtcaagcgcaacttgcgcgaggccgggtacggcaaggtcaagaccggg
cacggcgggacactcgatccactggccagcggcgtgctgccgatcgcgctgggcgaggcg
accaagctggccgggcggatgctcgacggcgacaaggtctatgagttcacggttcacttc
ggggcggagaccgacacgctcgacctcgaggggacggttgtcgcgcaaagcgacattcgc
ccgacattggcggcggtcgacgcggtgatggcgcggtttaccggcgcgatcgaacaggta
ccgcccgcgttctcggcgctgatggtcgaggggcggcgggcatacgatctggcgcgggca
ggggaggaagtggcgcttccggccagagccgtcaccatccattccctcaccgctggtgtc
gagcgaagtcgagacaccggcgccggcacctctacttcgctcgacaccagcgggtatttg
agttgcttgtcgctcaccgctcacgtctcgaagggcacctacatccgcagtcttgcgcgc
gacttcgcccgcgccctcggcacggtgggtcacgttacctatctgcgccgcatcagggca
gggccgttcgggctggacgccgcgatttcgctggacatgctggaagaaatcggcaagggc
gcgcgccttgagaactctctcttgccgctggaggcggggctggacggtatcccggctctc
gacctcggcccggaacaggcaagggcggtccaccagggccgcgttctgaccgggctggcc
tttcaggatggggtctgctgggcgcgatacggcgataggccgctcgcgctgctgcaggtc
gctggcggcaacgccaccgtgctgcgaggcttcaaccttcccgataccgcggagtaa
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