Novosphingobium sp. Gsoil 351: GKE62_14665
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Entry
GKE62_14665 CDS
T06443
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GKE62_14665 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nog01007
]
GKE62_14665 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nog03016
]
GKE62_14665 (aspS)
03029 Mitochondrial biogenesis [BR:
nog03029
]
GKE62_14665 (aspS)
Enzymes [BR:
nog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
GKE62_14665 (aspS)
Amino acid related enzymes [BR:
nog01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GKE62_14665 (aspS)
Transfer RNA biogenesis [BR:
nog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GKE62_14665 (aspS)
Prokaryotic type
Other AARSs
GKE62_14665 (aspS)
Mitochondrial biogenesis [BR:
nog03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
GKE62_14665 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QGN55602
UniProt:
A0A6I5X0C9
LinkDB
All DBs
Position
3029832..3031610
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AA seq
592 aa
AA seq
DB search
MHPYRTHTCAALRRADVGAQARLSGWVHRKRDHGGLLFVDLRDHFGLTQIVVDTDSPAFV
ALERLRVESVVTVTGKVVARTADTVNSNLPTGEIEIRATEVEVRSAAEELPMPVAGEQDY
PEDIRLKYRYLDLRREKVHANMMLRSAVIASLRRRMIEQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFAAIEPVLGGVFAEFGNGRTVTEGAFPRIPYRESMLKYGSDKPDLRNPLTI
TDVTEHFRGSGFGLFDRIVSEGGVVRAIPAPGAGKLSRKFFDEMNEWARGEGHAGLGYIN
IKEGVPAGPIAKNHGEEATAALVAALGLGSDDGVFFAAGKEAQATKLAGLARTRTAESLK
LIEEDAFRLCWIVDFPMFEYDEEAKKIDFSHNPFSMPQGELEALETQDPLTIKAWQYDIV
CNGVELSSGAIRNHRPEIMYKAFEIAGYSRDQVDADFAGMINAFKFGAPPHGGSAPGVDR
IVMLLADEPNIREVIVFPMTQKAEDLMMNAPAPVTPKQLRELQLRVVEQAKG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctatcgcacccacacctgcgcggcgttgcgccgggccgacgtcggcgcccag
gcgcggctttcgggctgggtccaccgcaagcgcgaccatggcgggctgctgttcgtggat
ctgcgcgaccatttcgggctgacccagatcgttgtcgataccgacagcccggcgttcgtt
gcgctcgaacgactgagggtggaaagcgtggtgacggtgaccggcaaggtcgtcgcgcgc
accgcggataccgtgaacagcaatctcccgaccggcgagatcgaaatccgcgcgaccgaa
gtcgaagtgcgctcggcggcggaggaactgccgatgccggtggcgggtgagcaggattat
cccgaggacatccgcctcaagtatcgctatctcgacctgcgccgcgagaaggttcacgcc
aacatgatgctgcgctcggcggtcatcgccagccttcggcggcgaatgatcgagcagggc
ttcaccgagttccagaccccgatcctgaccgcatcctcgcccgaaggcgcgcgcgactat
ctggtgcccagccgggtgcatccaggcaagttctacgcgcttccccaggcgccgcagatg
ttcaagcagttgctgatggtcgccgggttcgacaagtatttccagatcgccccatgcttc
cgagacgaggacgcccgggccgaccgtagcccgggcgagttctaccagctcgatttcgag
atgagcttcgtgacccaggacgatgtcttcgcggcgatcgaaccggtgctgggtggggta
ttcgccgagttcggcaacgggcggacggtcaccgaaggcgcattccctcgcatcccttac
cgcgaatccatgctcaaatacggcagcgacaaacccgacttgcgcaacccgctgacgatc
accgacgtcaccgaacacttcaggggatcggggttcggcctattcgaccggatcgtgagc
gaaggcggggtggtcagggcgatcccggcgcccggagcgggtaaactgagccgcaagttc
ttcgatgagatgaacgagtgggcgcgaggcgagggtcatgcgggcctcggctacattaac
atcaaggaaggcgtccccgctggcccgatcgccaagaaccacggcgaggaagccaccgcg
gcgctggtcgccgcgctcgggctggggtccgacgacggcgtgttcttcgccgcgggcaag
gaggcgcaggcgactaaacttgccggtctcgcgcgcacacgcacggcggagagcctcaag
ctgatcgaggaagacgcgttccggttgtgctggatcgtcgatttccccatgttcgagtac
gacgaggaggccaaaaagatcgatttcagccacaacccgttctcgatgccgcagggcgag
ctcgaggcgctggagacgcaggacccgctcacgatcaaggcttggcagtacgacatcgtc
tgcaacggggtggaactgtcgtcgggcgcgatacgaaaccatcgcccggagatcatgtac
aaggcgttcgagatcgccggctattcgcgcgatcaggtcgatgcggacttcgcgggcatg
atcaacgcgttcaagttcggtgcacccccacatggtggctccgcgcctggggtcgaccgg
atcgtgatgctgctggccgacgaacccaacattcgcgaggtaatcgtcttcccgatgacc
cagaaggccgaagacctgatgatgaacgctcccgcaccggtcacgcccaaacagctgcgc
gagctgcagctgcgggtggtggagcaggccaagggctag
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