KEGG   Novosphingobium sp. Gsoil 351: GKE62_16535
Entry
GKE62_16535       CDS       T06443                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
nog  Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:nog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nog03032]
    GKE62_16535
   03400 DNA repair and recombination proteins [BR:nog03400]
    GKE62_16535
Enzymes [BR:nog01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     GKE62_16535
DNA replication proteins [BR:nog03032]
 Prokaryotic type
  DNA Topoisomerases
   GKE62_16535
DNA repair and recombination proteins [BR:nog03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GKE62_16535
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: QGN55922
UniProt: A0A6I5X160
LinkDB
Position
3432427..3433458
AA seq 343 aa
MTQTTFRAGKSRLIYCDDSLPGLTRRKAGKGWAYFDAKGRRVTDRDEIDRLNRIALPPAY
VDAWFCPADNGHLLATGIDAKGRKQYRYHPDFRALQEGEKFDSAARFGRLLPLVRKRVED
DLRSPRLTRERAVASIVRLLDTGGIRVGNETYAKDNKSFGATTLRMRHADVSGSVLKLRF
KAKSGKLCEMKISDKSLARFVKRMQDLPGQHLFQYLDDDGVAQPVGSAEVNDYLRETMSE
DFTAKNFRTWHASAIGLQTLAEAQGALSVKALAEAVSARLGNTPAIARKSYIHPAVIALV
DRQVKWRATLKLPRATRWLSPHERALIDLLEKGPSAAKLIAAA
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgactcagaccaccttccgcgcgggcaaatcgcgcctgatctattgcgacgacagcctc
ccggggctgacccgccgcaaggccggcaagggctgggcgtacttcgacgcgaagggccgg
cgcgtgaccgaccgcgacgagatcgaccggctcaaccgcatcgcgctgccccccgcttat
gtcgacgcgtggttctgcccggcggacaacggccacctgctcgccaccggcatcgacgcc
aaggggcgcaagcaataccgctatcaccccgatttccgcgcgctccaggaaggcgagaag
ttcgattcggccgcgcggttcgggcgcctgctgccgctggtgcgcaagcgggtcgaggac
gatctgcgctcacccaggctgacccgcgaacgcgcggtggcgagcatcgtccgcctgctc
gacaccggcgggatccgcgtcggcaacgagacatacgccaaggacaacaagagcttcggc
gcgaccacgctgcggatgcgccacgccgacgtctccgggagcgtgctcaagctgcggttc
aaggccaagtcgggcaagctgtgcgaaatgaagatcagcgacaagagcctcgcccgcttc
gtcaagcggatgcaggacctgcccggccagcacctgttccagtatctcgacgacgacggc
gtggcgcagccggtcggctcggccgaggtcaacgactacttgcgcgagaccatgagcgag
gatttcaccgccaagaactttcgcacgtggcacgccagcgcgatcgggttgcagacgctg
gccgaggcgcaaggcgcactgtcggtcaaggcgctggccgaggcggtgtccgcacgtctt
ggcaacaccccggcgatcgcgcgcaaaagctatattcacccggcggtgatcgcgctggtc
gaccgccaggtcaaatggcgcgcgacccttaagctgccgcgcgcgacgcgatggctgtcg
ccgcacgaacgcgctttgatcgatctgctcgagaagggccccagcgcggcaaaactgatc
gcggcggcataa

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