Novosphingobium sp. Gsoil 351: GKE62_17130
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Entry
GKE62_17130 CDS
T06443
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03030
DNA replication
nog03430
Mismatch repair
nog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKE62_17130
03430 Mismatch repair
GKE62_17130
03440 Homologous recombination
GKE62_17130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nog03032
]
GKE62_17130
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_17130
Enzymes [BR:
nog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKE62_17130
DNA replication proteins [BR:
nog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKE62_17130
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKE62_17130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
RuvB_N
AAA_22
AAA_assoc_2
AAA_30
Cdc6_lid
AAA_19
AAA_14
AAA_16
Glyco_tranf_2_5
AAA_24
AAA_18
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QGN56011
UniProt:
A0A6I5X1L2
LinkDB
All DBs
Position
3567246..3568943
Genome browser
AA seq
565 aa
AA seq
DB search
MGDSPDIFGNEPADEAEMPGLGLDQPAQPQPAQPYRVLARKYRPQTFSELIGQEPMVRTL
GNAIRRERLAHAFLMTGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGTCEPCRAIA
EGRHIDVIEMDAASHNGIDDVRAMTDAVRYAAVTARYKIYIIDEVHMMSKPAFNALLKTL
EEPPAHVKFLFATTEVDKLPITVLSRCQRFDLRRITTPMLTEHFARICAAEKVEADDEAL
ALIAAAAEGSVRDGLSILDQAIAHADLEGEAVVTAAKVREMLGLADKTVQRRLFATILRG
EGKALLDLVAEQYALGIEPLALIRAQMDLVHRITVAQLGESGAQGATAEERAALEGWAGQ
LSAGQLHRLWQLLLKGHGEIVSAPDPLAAAQMALLRVLHAADLPDPGQLAKKLEEMAARS
PVPAPAAGRTASAEPVAALDWTALVERIETARPLVGGVMRNWIRPVDVSHGVLRFQIDAD
YRAEDPAADIRKALEEVTRERWQVERGVGDAQPSLRERAEAEATAAQAALLADPLVKAAF
AAFPDAQLVDDERASPGRTPWSRSA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcccccgacatcttcggcaatgaaccggcggacgaggcagaaatgcccggc
cttggcctcgaccagccggctcagccgcaaccggcccagccctatcgcgtcctcgctcgc
aagtaccgtccgcagaccttttccgagctgatcggccaggaaccgatggtccgcacgctg
ggcaacgcgatccggcgcgaacggctggcgcatgcgttcttgatgaccggggtgcgcggc
gtgggcaagaccagcaccgcgcggctgatcgccaaggcactgaactgcatcgggcccgac
gggcagggcggacccacgatcgatccctgcggaacttgcgagccgtgccgcgcgattgcg
gaagggcgccacatcgacgtgatcgagatggatgccgcctcgcataacgggatcgacgac
gttcgcgcgatgaccgacgcggtgcgctatgcggcagtcaccgcgcggtacaagatctat
atcatcgacgaagtccacatgatgtcgaagccagccttcaacgcgcttctgaagacgctc
gaggagccgcccgcgcacgtcaagttcctgttcgcgacgaccgaggtcgataaactgccg
atcaccgtgctcagccgctgccagcggttcgatctgcgccggatcaccacacccatgctg
accgaacacttcgcgcggatatgcgctgcggagaaggtcgaggccgatgacgaggcgctg
gcgctgatcgcggcggccgccgaaggctcggtgcgtgatggtttgtcgatcctcgatcag
gcgatcgcccatgcagacctggaaggcgaggccgtggtcaccgccgccaaggtccgtgag
atgctcgggcttgccgacaagactgtccagcggcgcctgttcgcgacaatccttaggggc
gagggcaaggcgctgctcgatctggtcgccgagcaatatgcgctgggcatcgagccgttg
gcgctgatccgcgcgcagatggatctcgtccaccggatcaccgtcgcccagcttggcgag
agcggcgcgcagggcgcgaccgcggaagagcgtgcagcgctcgaaggctgggccgggcaa
ttgtccgccgggcaacttcatcgtctttggcaactgctgctcaagggccacggcgaaatc
gtcagcgcgcccgatccacttgcggctgcccagatggcgctgctgcgcgtgctccatgcc
gcagatcttcccgatcccggacaattggcgaaaaagcttgaggagatggcggcgcgcagt
cccgtcccggcacccgccgccggtcgtaccgcgtccgccgaaccggttgccgcgcttgac
tggaccgcgttggtcgagcggatagaaaccgcaaggccgctggttggtggcgtaatgcgc
aactggattcgcccggtggacgtctcgcatggcgtcctgcgattccagatcgacgccgac
taccgggccgaggaccccgccgccgacattcgcaaggcgctggaggaggtcacccgcgag
cgctggcaggtcgaacgcggggtcggcgacgcgcagcccagcttgcgcgagcgggctgag
gccgaggccaccgcggcgcaggccgcgctgctcgccgatccgctggtcaaggccgccttc
gccgcctttcccgatgcccaattggtcgacgacgagcgcgcctcgcccggccgcacccca
tggagtcgcagcgcatga
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