KEGG   Novosphingobium sp. Gsoil 351: GKE62_17145
Entry
GKE62_17145       CDS       T06443                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
nog  Novosphingobium sp. Gsoil 351
Brite
KEGG Orthology (KO) [BR:nog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nog03032]
    GKE62_17145
   03036 Chromosome and associated proteins [BR:nog03036]
    GKE62_17145
   03400 DNA repair and recombination proteins [BR:nog03400]
    GKE62_17145
DNA replication proteins [BR:nog03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GKE62_17145
Chromosome and associated proteins [BR:nog03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GKE62_17145
DNA repair and recombination proteins [BR:nog03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GKE62_17145
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 VWA_3 GTP_EFTU_D2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QGN56014
UniProt: A0A6I5X297
LinkDB
Position
3572044..3572316
AA seq 90 aa
MNKNDLISAVADSSGLTKGDAMKAVESVFEAISGALKSGDEVRLVGFGTFSVAKRKASTG
RNPRTGEPMTIKASTQPKFKAGKGLKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagaacgatctgatcagtgcggtcgccgactcgagcggactgaccaagggtgac
gcgatgaaggcggttgaatccgtgttcgaggcgatctcgggcgcgctcaagagcggcgac
gaagtgcgcctggtgggcttcggtacgttctcggtagccaagcgcaaggcctcgaccggt
cgcaacccgcgcaccggcgagccgatgacgatcaaggcttcgacccagcccaagttcaag
gccggcaagggtctgaaggacgcggtcaactaa

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