Novosphingobium sp. Gsoil 351: GKE62_18210
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Entry
GKE62_18210 CDS
T06443
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKE62_18210 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_18210 (uvrB)
DNA repair and recombination proteins [BR:
nog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKE62_18210 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GKE62_18210 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QGN56193
LinkDB
All DBs
Position
complement(3784936..3787131)
Genome browser
AA seq
731 aa
AA seq
DB search
MAELVIRRGLEEPDTSAAFVPHKPARPDKADGGKRFKIVSEYQPAGDQPTAIADLIEGIK
ADDQTQVLLGVTGSGKTFTMAQVIEATQRPALILAPNKILAAQLYGEFKSFFPDNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDLKKGATVDQREIVRKLVALQYKRNDAAFQRGNFRVRGDSLEIFPSHYED
MAWRISFFGDEIEDIAEFDPLTGKKGASLNSVRVYANSHYVTPGPTLQQAAQAIRFELTE
RLKELEAEGKLLEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMAKGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
VAVSATPGGWEMEQSGGIFAEQVIRPTGLIDPPVEIKPVEDQVQDCIEECRKTAAMGFRT
LVTTLTKRMAEDLTEFMHEAGLRVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVEGRVILYADRMTGSMERAIAETD
RRRQKQHEFNLANGITPATIKRGIQDIVAHTASRDGVLVEIDDPERNNLVGHNLRGYIED
LEKRMRAAAADLEFEEAGRLRDEIRRLEADELGLPKAHEQAKAPKVGRSNEGKPGTRKGR
FGKASKMKWGR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcgtcattcgtcgcgggctggaagagcccgacaccagcgccgctttcgtt
ccgcacaagcccgcccggccggacaaggccgacggagggaagcggttcaagatcgtctcc
gaataccagcccgcgggcgaccagccgaccgcgatcgcggacctgatcgaagggatcaag
gctgacgatcagacccaggtgctgctcggcgtgaccggcagcggcaagactttcaccatg
gcccaggtgatcgaggcgacccagcgcccggcgctgatcctagcgcccaacaagattctc
gccgcgcagctctatggcgagttcaagagcttctttcccgacaacgcggtcgagtatttc
gtcagctactacgactattaccagcccgaagcctacgtgccccgcagcgacacttacatc
gagaaggaaagctcggtgaacgaggcgatcgatcggatgcgccattcggccactcgcgcg
ctgctcgaacgcgacgacgtcatcatcgtcgcttcggtctcgtgcctctatggcatcggc
tcggtcgagacctattccgcgatgatcttcgacctgaagaaaggcgcgacggtcgatcag
cgcgagatcgtgaggaagctcgtcgcgctgcaatacaaacgcaacgacgccgcgttccag
cgcggcaatttccgtgtgcgcggcgacagcctggagattttcccctcgcattatgaggac
atggcctggcggatcagcttctttggcgacgagatcgaggacatcgccgagttcgacccg
ctgaccggcaagaagggcgccagcctcaattcggttcgggtctacgccaactcgcactac
gtaacccccggcccaacgctccagcaggcggcgcaggcgatccgcttcgagttgaccgag
cggctcaaggaactggaggccgagggcaaattgctcgagcaccagcggctcgagcagcgc
accaacttcgacctcgagatgatcgctgccaccggaagctgcgcggggatcgagaactac
agccggttcctcaccggccgcctgcccggcgaaccaccgccgacgctgttcgaatacctc
ccggaaaacgcgctgctgttcgtcgacgaaagccaccagacggtgccgcagatcggggcg
atggccaagggtgaccaccgccgcaagatcaccctggccgaatacggctttcgcctgccc
agctgcatcgacaaccgtccgctgcgcttcaacgaatgggacgcgatgcgaccgcagacc
gtcgcggtctcggccacgccgggcggttgggagatggagcaatcgggcggtatcttcgcc
gagcaggttatccgcccgaccgggctgatcgacccgccggtggagatcaagccggtcgag
gaccaggtccaggactgcatcgaggaatgccgcaagaccgccgcgatgggctttcgcacg
ctcgtcaccacgctgaccaagcggatggccgaagatcttaccgagttcatgcacgaggcc
gggctgcgggtgcgctacatgcactcggacgtcgaaacgctggaacgcatcgagctgatc
cgcgatctgcggctgggggtctatgatgtgctggtcggcatcaacctgctgcgcgaaggg
ctcgacatccccgaatgcgggctggtctgcatcctcgacgccgacaaggaagggttcctg
cgcagcgaaaccagcctgatccagacgatcggccgcgccgcgcgcaatgtcgagggccgc
gtgatcctctacgccgaccggatgaccggcagcatggaacgcgccatcgcggagacagat
cgccgccgccagaagcagcacgagttcaacctcgccaatggcatcaccccggcgacgatc
aagcgcggtatccaggacatcgtcgcgcataccgcgagccgcgacggggtgctggtcgaa
atcgacgaccccgaacgcaacaacctcgtcggccacaacctgcgcggatacatcgaggat
ctggaaaagcgaatgcgcgcggcggccgccgacctggagttcgaggaggcagggcgattg
agggatgaaatccggcgcctggaagcggacgaactcggtttgccgaaggcgcacgagcaa
gcgaaagcgcccaaggtggggcgaagcaacgaaggcaagccggggacgcgaaaggggcgg
ttcgggaaggcgagcaagatgaaatgggggaggtga
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