Nordella sp. HKS 07: G5V57_03680
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Entry
G5V57_03680 CDS
T06462
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
noh
Nordella sp. HKS 07
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
noh01002
]
G5V57_03680
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
noh01011
]
G5V57_03680
Peptidases and inhibitors [BR:
noh01002
]
Cysteine peptidases
Family C82
G5V57_03680
Peptidoglycan biosynthesis and degradation proteins [BR:
noh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
G5V57_03680
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QIG46925
UniProt:
A0A6G6WPA1
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All DBs
Position
759582..761477
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AA seq
631 aa
AA seq
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MRLTRGLAGASALVLALSLSAPQAMAERDMDTPSRVVKSSGSIFDYFKRKREARRETLRR
NREPGPRIQNAPLIDVDKPEPPLVYQPEKLEALQAESFSEPEPTEPLAQAVYRELQSREA
APRVTRNEKTAIIDLYRANGFKPLWTTPDGLDQRGQDVLRLLSKSADEAMQPSDYLPPAL
GTFTDSPTSFKGDLVHLARLDLGITAMALKYARHASGGRIIPNQLTKYNDIETEPVAPGT
AIKVLAWSPFPVEYLNSLQPRHPAYALFKAELAKKRAALHVADSETIPPGRRVKPGDKDS
RIILVRHYLERLGYLEGEDTAQNSLPATTEDAAYGLKLVLDPAVSDALSAFQTEAQIKVT
GALDQATVNALNGRSEESMVSRLVYNMERLRWLPKTLGSKYVFVNQAAYQLEVVDNGREV
WRTKVIIGKPETQTVAFHDRMETVVFNPSWGVPPSIIRNEMLPILRRDPSYLDRLGYRVI
TKGGQIVRSSSVNWSAYRKGVPYSIQQPPSDDNALGEVKFLFPNSHSIYFHDTPARSLFE
RSARAFSHGCVRVENPRIFAETLLGLSDEEVAKRIDSGVSQSAKVKEDIKVHLTYFTAWP
DQKGRIVYYDDVYGRDQRMETAFSATAVAAR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgacgcggggattggcgggcgcctctgcgctcgttctggctttgagcctgtca
gctccccaagccatggccgagcgcgacatggatacgcccagccgggtcgtcaaaagctca
ggatccatcttcgactatttcaaacgcaagcgcgaagcccgccgtgaaacactgcggcgc
aatcgggagccgggcccccgtatccaaaatgcgcccctgatcgatgtggacaagcccgag
ccgccgctcgtctaccagccggaaaagctggaagccttgcaggcggagtcgttcagcgag
cccgagccgaccgagcccctggcccaggccgtataccgagaattgcagagccgggaagcg
gccccgcgcgtcacccgcaacgaaaagacggctatcatcgatctctaccgcgccaacggc
ttcaagcctttgtggacgacgcccgacgggctcgaccagcgcggccaggacgtgctgcgt
cttctgtcgaagagcgccgacgaggcgatgcagccctccgactatctgccaccggccttg
ggaacctttaccgacagcccgacctccttcaagggagacttggtccatctcgccaggctt
gacctgggcataacggccatggcgctgaaatatgcccgccatgcctcgggtggccggatc
atcccgaaccagctgaccaaatacaacgatatcgagactgagccggtggcgccgggcact
gccatcaaggtcttggcctggagcccatttccagtcgaatatctcaacagcctgcagccg
cggcatccggcctatgccttgttcaaggccgagctcgcaaaaaagcgcgccgcgcttcat
gtggctgacagcgagactattccgccgggcaggcgggtgaagcccggcgacaaggattcg
cgtatcatcctcgtccgccattatctcgagcggctcggctatctcgaaggcgaggacacg
gcgcagaacagcctgcctgccaccaccgaagacgccgcctatggccttaagctggttctt
gacccggcggtgtcggatgcgctgtcggccttccagaccgaagcccagatcaaagtcacc
ggcgcgcttgaccaggcgaccgtcaatgccctcaacgggcgcagcgaagaaagcatggtc
agcaggctggtctacaacatggagcgcctgcgctggctgccgaaaacgctgggcagcaaa
tatgtcttcgtgaaccaggccgcctatcaactggaagtcgtggacaacggccgcgaggtg
tggcgcaccaaggtcatcatcggcaaacccgagacccagacggtcgccttccacgatcgg
atggaaacggttgtcttcaatccctcctggggcgtgccgccatcgatcatccgcaacgaa
atgctgccgatcctgaggcgagatccttcctatctggaccggctgggctaccgcgtcatc
accaagggcggccagatcgttcgctcgagctcggtcaactggtcggcctaccgcaagggc
gtgccctattccatccagcagccgccgagcgacgacaacgcgctgggcgaggtgaaattc
ctgtttcccaattcacacagcatctatttccacgacacgccggcgcgctcgctcttcgag
cgctccgcccgtgccttcagtcatggctgtgtgcgcgtggagaacccccgtatcttcgca
gaaacgcttctgggcctgagcgacgaagaagtggccaagcgcatcgatagcggcgtgagc
cagagcgccaaggtcaaggaagacatcaaggtccatcttacctatttcactgcctggccg
gatcagaagggcaggatcgtctactatgacgatgtctatggccgcgatcagcgcatggag
accgccttctcggccacggctgtggcagcaaggtga
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