Nordella sp. HKS 07: G5V57_04470
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Entry
G5V57_04470 CDS
T06462
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
noh
Nordella sp. HKS 07
Pathway
noh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5V57_04470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noh02000
]
G5V57_04470
Transporters [BR:
noh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5V57_04470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
FAM186A_PQQAQ
Motif
Other DBs
NCBI-ProteinID:
QIG47065
LinkDB
All DBs
Position
complement(921339..922364)
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AA seq
341 aa
AA seq
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MKKLWVALGALVVTLASTAASAQEKLIVSVWGGNWKDGAAIIAKEFTKRTGMEVEFITGG
TLDRLAKAKVAKDNPESDVTYTTSHVGYLYQSDGLFEKLDKSKIPNFANLHPAADRGDYE
VGVYSYVYSPVFRTDLMPKDFRISSWNDLWSEGVAGKLSMPDFDPSHIIVASAILAGGNA
TTWEAGIPLLEKLKPNIKAFYQSDATSQDLLKTGETPVQIMLSINAYHLIQNGVPITIEI
PKEGAVVGIGALGINKGTKKLDAAQEFINVALDPIVQRDICNFHKCSPMNKDAQIDPELA
KLPGIFTTPEQWSTQAIVTPDEVQAKLLPTWKVWFTENMMQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctttgggtcgcgctcggcgcgctcgtcgtcaccctcgccagcaccgccgct
tcggcgcaggaaaagctcattgtcagcgtctggggcggcaattggaaggacggcgccgcc
atcatcgccaaggagttcacaaagcgcaccgggatggaggtcgagttcatcaccggcggc
acgctcgaccggctcgccaaagcgaaagtcgccaaggacaatcctgaatcggacgtgacc
tatacgacgagccatgtcggctatctctatcagtccgacggcctcttcgagaaactcgac
aagagcaagatcccgaatttcgccaacctgcatccggcggcggatcgcggcgactatgaa
gtcggcgtctattcttatgtctatagcccggtcttccgcaccgatctcatgcccaaggac
ttccgcatcagctcgtggaacgacctgtggtcggaaggtgtggcgggtaagctgtcgatg
ccggatttcgatccgagccacatcatcgtcgcatcggcgatcctggccggcggcaacgcc
accacatgggaagccggcattccgctgctcgaaaagctcaagcccaatatcaaggccttc
taccagtcggacgcgaccagccaggatcttctcaagacgggcgaaacgccggtccagatc
atgctgtcgatcaacgcctatcacctgatccagaacggcgtgccgatcaccatcgagatc
ccgaaggaaggggcggtcgtcggcatcggcgcgctcggcatcaacaagggcaccaagaag
ctcgacgcggcgcaggagttcatcaatgtcgcgctcgatccgatcgtgcagcgcgatatc
tgcaacttccacaaatgctcgcccatgaacaaggatgcccagatcgatccggagctcgcc
aaactgccgggcatcttcaccacgccggagcagtggtcgacccaggcgatcgtgacaccg
gatgaggtccaggccaagctgctgcccacctggaaggtgtggttcaccgagaacatgatg
caataa
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