Nordella sp. HKS 07: G5V57_05805
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Entry
G5V57_05805 CDS
T06462
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
noh
Nordella sp. HKS 07
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noh03016
]
G5V57_05805 (truB)
Enzymes [BR:
noh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G5V57_05805 (truB)
Transfer RNA biogenesis [BR:
noh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G5V57_05805 (truB)
Prokaryotic type
G5V57_05805 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QIG47287
UniProt:
A0A6G6WQ68
LinkDB
All DBs
Position
complement(1207005..1207916)
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AA seq
303 aa
AA seq
DB search
MNKRQNIHGWIALDKPEGLGSTQALAKVKRLFNAAKAGHGGTLDPLASGLLPIALGEATK
TVSWAMDGHKTYRVLIEWGEARTTDDREGEVCGRSAHRPETRDIVANLARFEGEILQTPP
KFSAIKVGGERAYDLARAGEEVALSARTVQIDKIELLAQPDPDHAEFSVTCGKGTYIRSL
ARDMAEALGTLGHVARLRRTAVGPFTEGDMISLEKLAELSHKAAGDNAMEGVLRPIETVL
DGIPALAVKDAEAQRLRQGQPVLLRGASAPIAQDAVLVMWGRRPLGICSIEKGSLKPKRL
FNL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcgtcagaatatccatggctggatagccctcgacaagccggaaggactggga
tcgacccaggccctggccaaggtcaagcggctgttcaatgccgccaaggccggccatggt
ggcaccctcgatcccctggcttcgggcctcctgccgatcgcgctcggagaggcgaccaag
accgtgtcctgggccatggacgggcacaagacctatcgggttctgatcgagtggggcgag
gcgcgcaccaccgatgaccgggaaggcgaggtctgcggtcgctcggctcatcgccccgag
acccgtgatatcgtcgccaatctcgcccggttcgaaggcgaaatcctgcagacgcccccc
aaattctcggcgatcaaggtcgggggcgaacgggcctatgatctggccagggccggggaa
gaggtggccctctcggcccggacggtgcagatcgataaaatcgagctcctggcccaaccg
gacccggatcatgctgaattttcagtcacttgcgggaaggggacgtatatccgctcgctc
gcccgcgatatggcggaggcgctcggcacgctcggccatgtggcgcgcttgagacgcacc
gcggtcggaccgtttaccgaaggtgatatgatttcgctggaaaagctggctgaactgagc
cataaggcggccggcgacaacgccatggaaggggttctccgacccatcgagaccgtgctg
gacggcatcccggcactggccgtgaaggacgcggaggcccaacgcctgagacagggccaa
ccagttctgctcagaggcgcaagcgctcccatcgcacaagatgcggttctcgttatgtgg
ggtcgaagacccctcgggatctgctctatcgaaaagggctcgctcaagccgaagcgtctt
ttcaatctataa
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