Nordella sp. HKS 07: G5V57_06585
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Entry
G5V57_06585 CDS
T06462
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
noh
Nordella sp. HKS 07
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noh03032
]
G5V57_06585
03400 DNA repair and recombination proteins [BR:
noh03400
]
G5V57_06585
Enzymes [BR:
noh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G5V57_06585
DNA replication proteins [BR:
noh03032
]
Prokaryotic type
DNA Topoisomerases
G5V57_06585
DNA repair and recombination proteins [BR:
noh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5V57_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
GP40
Motif
Other DBs
NCBI-ProteinID:
QIG47430
UniProt:
A0A6G6WQU6
LinkDB
All DBs
Position
complement(1392972..1393994)
Genome browser
AA seq
340 aa
AA seq
DB search
MSIWEDPSLPVQLRKADIDAFPIRRARPGKIRHVTNGKARSISSRDAARIAKLVIPPAWR
DVRISADPRSHIQAVGRDEAGRRQYIYHRDWEVVRNDVKARRLARLIAALPRIRGSIARD
LDREGDDAVLATAARLVDRLCLRAGHEEYAGEESGRGVATLLRKHVAVSGAIVSFDFPGK
GKKHIQASLDDSKCARNIARAKLSSGRRLFKLRSGKGYRNMTAGDLNRYLAGIAGAKISA
KDFRTLRASSVALERLAGSAGGTDTERRRALAQVAKEISAMLANTPAVTRKSYIHAAIIE
QHENGSLSYCTGKPLPRCTKAEQGLHDFLRAAGKRHKRNN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctgggaagatccctctctaccggtccagttgagaaaggctgacatcgatgcc
tttccgatccggcgggctcgccccggaaaaatccggcatgtcaccaatggaaaggcgcga
tcgatcagctcccgcgatgccgccaggatcgcgaagcttgtcattccgccggcctggcgg
gatgtccgcatcagcgccgacccgcgcagtcacatacaggcggtggggcgcgacgaagcc
ggacgccgccaatacatctatcatcgcgactgggaggtggtccgcaacgacgtgaaggcg
cgccgtctcgcccggctgatagccgccttgccgcgcataagaggcagtatcgcgcgtgac
ctcgatcgggaaggagacgacgccgttctcgcgaccgccgcgcggctggtggatcgtctg
tgcctgcgcgccgggcatgaggaatatgcgggcgaagaaagcgggcgcggcgtggctacg
ctgctgcgcaagcatgtcgccgtctccggcgccattgtatccttcgatttcccgggcaag
ggcaagaagcatatccaggccagtctcgatgacagcaagtgcgcgcgcaacattgcccgg
gcaaagctgtcgtccgggcggcgcctgttcaagttgagaagtggcaagggatacaggaac
atgacggccggtgatctcaatcgctatctcgcgggcatagcgggtgcgaagatctcagcc
aaggacttccggaccttgcgggcatcgtccgttgcgcttgagcgtctcgccggcagcgcc
ggcggaaccgacacggaaaggcggcgtgcgctggctcaagtcgcgaaggagatcagcgcc
atgctcgccaacacgccagccgtgacccgcaaaagctatattcacgcggcgatcatcgag
cagcatgagaatggctctctgtcctattgcacgggaaagccacttcccagatgcacaaag
gcggagcagggcctgcacgatttcctccgcgcggccggcaagcgtcacaagaggaataat
tga
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