Nordella sp. HKS 07: G5V57_10290
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Entry
G5V57_10290 CDS
T06462
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
noh
Nordella sp. HKS 07
Pathway
noh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5V57_10290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noh02000
]
G5V57_10290
Transporters [BR:
noh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5V57_10290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QIG52419
LinkDB
All DBs
Position
complement(2191783..2192814)
Genome browser
AA seq
343 aa
AA seq
DB search
MRLFSAACFLAVLSVPAFADDVTVVSWGGAYQDSVRKAFFEPFMKESTDKIVEEEFNGEI
AKIRAMVETGNVTWDVVENDSMTTLAACAEGIVEKIDWDKLGLKRDDFISADASECVVPS
ILYSTVLAYDTTKVKEPPKSISAFFDLEKYPGKRGLQKSPFINLEWALIADGVDIKDVYN
VLSTPEGVDRAFAKLDTIKKDVVWWEAGAQPPQLLADGQVILTSAWNGRIYKAVNEDKKP
FAVMWNDQALDWQGWNVVKGSKHRDTAYKFIAFAGRADRQADQTNYISYGPGNKAAIANT
NPKITPDLPTNPENLKDGFIVNAKFWGDNIDALRERFNVWVAQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagattattctctgcagcgtgctttctcgccgtgctttcagttccagcatttgcggat
gacgtcaccgtcgtctcctggggcggcgcctatcaggacagcgtccgcaaagccttcttc
gaaccattcatgaaggaatccaccgataagatcgttgaagaggagttcaacggcgagatc
gccaagatccgcgccatggtcgagacgggcaatgtcacctgggacgtggttgagaacgac
tcgatgaccaccctcgccgcctgcgcggaaggcatcgtggagaagatcgactgggacaag
ctcggcctgaagcgtgacgatttcatcagcgccgatgccagcgaatgcgtcgttcccagc
attctctactcgaccgtgctcgcctatgacaccacgaaggtgaaggagccgccgaagtcg
atcagcgccttcttcgatctcgaaaaatatccgggcaagcgcggcctgcagaagagtccc
ttcatcaatctcgaatgggcgctgatcgccgacggcgtggacatcaaggacgtgtacaat
gtgctctcgacgcccgagggcgtagaccgcgccttcgccaagctcgacacgatcaagaag
gatgtcgtgtggtgggaagcgggcgcgcagccgccgcagctgctcgccgacggccaggtg
atcctgacctcggcctggaacggccgcatctacaaggccgtgaacgaggacaagaagccc
ttcgccgtgatgtggaacgatcaggccctcgactggcagggatggaatgtggtcaagggc
tcgaagcatcgcgacacggcctataaattcatcgccttcgccggccgtgccgaccgtcag
gccgaccagacgaactatatttcctatggaccgggcaacaaggcagcgatcgccaacacc
aacccgaagatcacgcccgatctgccgaccaaccccgagaacctgaaggacggcttcatc
gtcaatgcgaagttctggggcgacaacatcgacgcattgcgtgaacgcttcaatgtctgg
gtcgcgcagtaa
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