Nordella sp. HKS 07: G5V57_13680
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Entry
G5V57_13680 CDS
T06462
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
noh
Nordella sp. HKS 07
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noh03400
]
G5V57_13680 (addB)
Enzymes [BR:
noh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5V57_13680 (addB)
DNA repair and recombination proteins [BR:
noh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G5V57_13680 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QIG48682
UniProt:
A0A6G6WTU1
LinkDB
All DBs
Position
2897489..2900488
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AA seq
999 aa
AA seq
DB search
MSLRLFNIPPDVAFLPALTRAILAGNFPADLPPPSLDELPRWTILLPTRRAVRILQRSFL
TVAGREAMLLPRIRPIGDVEEDLLVPDDSSPADDLLAPAISALEREALLIRLIDEWVVAY
PDERLSREIAGSPSQAIALAESLSELVDTFETEEADLAKLSDLFAADLAEHRTAILGFLA
IVRERLPHELETLGLLGPMERRSRLLRLEAKRLAELRPESPIIVAGSTGSIPAASELMKT
IAALPNGAVVLPGLDQTMSEEAWQHVSPQHPQFGLKRLLDSWNQGRSDVRPLPGIDDSPR
NPARSWLASEIMRPTAAAGSWREALFAGRDEIVRGMAGVSLIERADHHQEAQTIALIMRE
VLEEPGKTAALVTPDRDLARRVVSALKRWGVEIDDSAGVALNRRPMGSLLSALIDYRLSD
FAIHEFAKLLHHPLAIFGQPPEAARKAAGIIDLALLRSGLDRLAPDAIVDALVKARREAE
TDIHTLMALKRLSEPDWALAQDQARAASAALASLMPGGEASLAQHAGVFTAALEHVADRT
ADAPAAEAIDLLVQSLAAAERFLPECGPERAALFLAGWLRRLPVRLSVHHPRLSILGLLE
ARLINPDVVIMGGLTEASWPAQPDPGPWINRPMRESLGMTPPERSIGLTAHDFAQGLGAP
KVVLTWSKRVKEQPAVASRWILRLRMILEATGTAFDDGAAWRQWARTFDDARGDRRVVMP
RPRPPVAARPRSLSITQVEKLMRDPYRIYAEKVLRLEPLPPIGAAADLGLRGNLIHDTLN
LFSSAYPVTLPVDAESELKRLGSEVFAPHMADADVAGFWWPRFLRIVPWFVAEERNLRQG
LLRIHAEVAAAHEFDGFTLTGRADRIDIMASGKARLIDYKTGRIPTGSQVKTGLAPQLTL
EAALLAAGSFKGVEPAETEALLYIKLSGGAPPGLLQPIADLEIMEKAQEHLEKFKALIRA
YDDVTKGYLPRAAMEKEQDTSPFDHLSRWREWSLAEDAS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
gtgagccttcgccttttcaacattccacccgacgttgcgtttctgcccgctttgacgcgc
gcgatcctcgccgggaatttcccggccgacctgccgccgccatcgcttgacgagctgccg
cgctggaccattcttctgccgacgcggcgcgccgtgcgcatcctgcagcgcagctttctc
accgtggcggggcgcgaggcgatgctcctgccgcgcatccgtccgatcggagatgtggaa
gaagacctgctggtgcccgatgactcatcacccgccgatgatctcttggcgcccgccatc
tcggcgctggagcgggaggcgctgctcatccgtctcatcgacgagtgggtcgtggcttat
cccgacgagcgcctgtcgcgcgagatcgccggctccccttcacaggccatcgctctggcc
gaaagcctcagcgagctcgtcgacactttcgagacggaagaggccgatctcgcgaagctg
tccgatctcttcgccgccgatctcgcagagcaccgcacggcgatattgggttttctggcg
atcgtccgcgagaggctgccccacgagctcgaaacgctcggcctcctcggccccatggaa
aggcgcagccgtctcttgcggctcgaagcgaagcggctggccgagttgcgccccgaaagc
ccgatcatcgtggcgggctccaccggctccattccggcggcgtcggagcttatgaagacg
atcgccgcgctgcccaacggcgcggtggtcctgccgggcctcgatcagacgatgagcgag
gaagcctggcagcatgtctctccgcagcatccacaattcggcctgaagcgccttctcgac
tcatggaaccagggacgcagcgacgtgcggcccttgcccggtatcgacgatagtccgcgt
aacccggcgcgcagctggctcgcttccgagatcatgcggccgacggcggcggccggcagc
tggcgcgaggctcttttcgccgggcgcgacgagatcgtccgcggcatggcgggcgtcagc
ctgatcgagcgtgccgatcaccatcaggaggcgcagaccatcgccctcatcatgcgcgag
gttctggaggagccgggcaagaccgccgcactggtgacgcccgaccgcgatctggcgcgc
cgcgtcgtcagcgcgctgaagcgctggggcgtcgagatcgacgattcggccggtgtggcc
ttgaacaggcggccaatgggctcgctgctgtccgccctcatcgattaccggctctccgat
ttcgccatccacgaattcgccaaactgctgcatcatccgctggccatattcgggcagccg
cccgaggcggcgcgcaaggcggccggcatcatcgacctggcgctgttgcgctcagggctg
gatcgattggcgcccgatgccatcgtcgacgctctggtgaaagcgcggcgcgaggccgag
acggacatccacacccttatggcgctgaagcgcctgagcgagccggactgggcgctggcg
caagatcaggcgcgcgccgccagcgccgcgctggcaagcctgatgccaggcggcgaggcc
tcgctcgcccagcatgccggcgtcttcaccgccgcactggagcatgtcgccgacaggact
gccgatgccccggcggcggaagcgatcgatctgctcgtccagtcgctggcagccgcggag
cgcttcctgccggagtgcgggccggaacgcgcagcactcttcctggccgggtggctgcgc
cgcctgccggtgcggctctccgtccatcatccgcgcctttcgatattgggactgctcgaa
gcgcgcctgatcaatcccgacgtcgtcatcatgggcggcctcaccgaggcgagctggccg
gcccagcccgatcccggcccgtggatcaaccggccgatgcgcgagagcctgggcatgacg
ccgcccgagcgcagcatcggcctcaccgcgcatgacttcgcgcaaggtctcggcgcgccc
aaggtggtgctcacctggtcgaagcgcgtcaaggagcagcccgccgtcgcctcgcgctgg
atcctgcgcctcaggatgatcctcgaggcgaccggcacggctttcgacgacggcgccgcc
tggcgtcagtgggcgaggacgttcgacgacgcgcgcggtgatcgacgtgtcgtgatgccg
aggccaaggccgccggtcgccgccagaccgcgctccttgagcattacccaggtcgagaag
ctgatgcgcgatccctatcgcatctatgcggagaaggtgctgcgcctcgagcccttgccg
ccgatcggcgccgccgccgatctggggctcagaggcaatctcatccatgacacgctcaat
ctgttctccagcgcctatccggtgaccttgcccgtggacgcggaaagcgagctgaagcgg
ctcgggtcggaggttttcgcgccccatatggccgacgccgatgtggcgggcttctggtgg
ccgcgcttcctgcgtatcgtgccctggttcgtcgccgaggagcggaatctgcgccagggc
ctcctgcgcattcatgccgaggtcgcggccgcccacgagttcgacggcttcacgctgacc
ggccgcgccgaccgcatcgacatcatggcgtccggcaaggccaggctcatcgactataag
accggacgcattcccaccggctcccaggtcaagaccgggcttgccccgcaattgaccctc
gaggccgcacttctcgcggcaggcagcttcaagggcgtcgagcccgccgagactgaggcg
ctcctctatatcaagctctccggcggggcgccgccgggtctgctgcagcccatcgccgat
ctcgagatcatggagaaggcgcaggagcatctggagaaattcaaggcgctgatccgcgcc
tatgacgatgtcaccaagggctatctgccgcgcgcagcgatggagaaggagcaggataca
tcgcccttcgaccatctctcgcgatggcgcgaatggtcgctcgccgaggacgcgtcatga
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