Nordella sp. HKS 07: G5V57_23050
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Entry
G5V57_23050 CDS
T06462
Name
(GenBAnk) autotransporter domain-containing protein
Organism
noh
Nordella sp. HKS 07
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
He_PIG
TIG
Big_9
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
QIG50350
UniProt:
A0A6G6WZ57
LinkDB
All DBs
Position
4909561..4915014
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AA seq
1817 aa
AA seq
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MSLPSAVSRSNNRNRIGGRAEPRSSKRSLLAALAERLPDLASLSNNVRRKAPALVLALPA
ILILLSPIAARAADGDGCNYFRNNPAFYDNANYNVSSTGPATIINQAPFGPQTGIVNFAA
GTVVYYEYTVSNSAVNARLNRAPLAGVATVFVDTSTSSSGSITLPVDTRSMAASGYVPVS
GSGTVTWTIYCGVRAAQVIASTTGTVGAAMSFTPVTASFGRGTYSYALSGGTLPAGLSFN
TGTGAITGTPTAALAATTFTVTVTHQGTGSASQTFQLAVNASAPTIVAAFSPTSIVRGGS
STLTVTISNPNAGMQLTGVAVSASALPAGLTGSNPMTTCTSGAVTLAGDTLSLSGATLNA
STSCTVSITASSATPGNYSYTSGTVSASGPAPVSGSTATTPTPLTVTAPAPTVTSVAPTS
GPTAGGTTVIVRGTDFTGTTGPGGVRFGGTNATSYTVDGDTQITAVAPAGGAGVVDVTVT
APGGTSTTSAADQFTYVAAPVASSFTASALAYDVSGTNFSIAAHATNSPTSYAVGSATTA
QGGLVSVDAAGLVTYSAPVGFRGNDSFTFTATNLGGTSSPATVTVPISNPVLVSVFPVGG
GQRGIALSGVQINTTGGRSPHSCATTLNTGALPAGTQLNSDCTITGTPAASGTFTFTASV
TDSSLGTGPFTQATGPLVLTISAPTITLSPAAGALPGGSVGTAYSQSFTAGGGTSSYNYA
QTLGDLPTGLTLTGGTLSGTPTATGTFNFDITATDSSSAGSGGPYTRVQSYSITMVQGGQ
TISFGALPNASLSASPLTLSATASSGLAVGFSSTTTSICTVSGVTLTLLQTGTCSITASQ
AGDTDWNAASDVVQSFTVTPANLVLSTGGVSGNQVGASYSQSNTASGGIAPYAYALDAGA
FVPGTSLDQDTGLVSGTPIIAGTFSYLVRVTDSQGTPVTAIGSITTTTIAKGDQTASFTS
TAPSGAAVGGAAYTVTATATSGLGVVFSLDGASTGCALSGNSVTFTSTGTCQINGNQPGD
TNWNAAPQVQQSFTVGPAAAITASVTFAPATMGAGETGVVTITFTNTNASNSPAFNALLT
SPSLTERVAGDPGGTCSLGSASVPTATTVQFGDIVVAPGSCTITLSYTGATAGSTSGFTL
GAFTPGGYPTTSATAGNAFAVVPTVTGVSPPSGPVSQVVTVSGTGFSTTPGNNIVMFGTV
AGNVTAASATSLTVTAPATGSGPATVTVTANGQTSTGSATFTFIDKPVAADRPGVVVAFN
SPGTAIDLSGSISGGPHSSIAIGTAAAHGTTSIAGDVVTYTPATGYAGPDSFTYTATGAG
GTSNPGTVSIQVSVAVPTAEPLTINALSGRMVTVDLTGGAAGGPFTGGAIVSITPADTAD
VQLIEGGTAANRTYSLQFTSRTKTEQAVTVLYTLSNAGRTSAPLTLTFQVGARTDPSDDP
EVRGLEAAETGAARRAAETQIRNFGRRMEQLHDGRCTQGMGASLSLGVPMSDNAAPQQQV
DDDPTQPERIGSAGGTASDSTPAMAGADSQDPAVNCDLRDPGNIELWTNGTVTIGSRDAT
SGVDRFDFSTSGLTAGADIVLAPGVTFGVGVGVGRDQTDVGDNGSEVQASSWAVGAYGSF
RPVEDAFIDVLAGVGGIDFDLTRYVTDTGGFATAQRDTDLLFGSVRAGIDRNDGPLRWSL
FGGIEASRTNFDSYVEDGPESYSLTYDEREMDSINGLLGGRFEYSFLSGHTVLTPRGRFE
YRYAFEQAEGQRVRFSDWLTGPSYLIDADGWSRSEVTVEVGIGAALPMGWQMGGDVTGDL
SGNSRSMGLRLEISRDF
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctaccgtcggcggtaagcaggtcgaacaaccgcaaccggatcggcgggcgcgca
gagccgcgatcctcgaagcggtctctcctcgccgcgctagcggagcggcttcccgatctc
gcttcgctgtccaacaacgtccggcgcaaggcgcccgccctggtgctcgcgctgccggcg
atcctgatccttctctcgccgatcgctgccagggccgccgatggcgacggctgcaactat
ttcaggaacaatcccgccttctacgacaacgcaaactacaacgtcagcagcaccggccca
gccaccatcatcaatcaggcgccgttcggaccgcagaccggcatcgtcaacttcgcggcg
ggaaccgtagtctattacgaatatacggtttccaattctgcagtgaatgccaggctgaac
cgcgcgcctcttgctggcgtcgccaccgtcttcgtcgatacgagcaccagcagcagcggc
tccattaccttgccggtggacacgcgttccatggcggcttcgggctatgtgccggtcagc
ggctccggcacggtgacctggacgatctattgtggcgtccgcgcggcccaggtcatcgct
tcgaccacgggcacggtgggcgcggctatgagcttcacgccggtcacagcctctttcggc
cgcggaacgtacagctatgcgctgagcggcggcacgctgcccgccggcctttcgttcaac
accggcaccggggccatcaccggcacgccgaccgctgcgctcgccgccaccaccttcacc
gtcaccgtgacgcaccagggaacgggttccgcgtcccagactttccagcttgcggtcaat
gcgtcagcgccgacgatcgttgcagccttcagcccgacctccatcgtcagaggcgggtcc
tcgaccctgaccgtgacgatcagcaatccgaatgccgggatgcagctgaccggcgtagcg
gtgtcggcatcggcgctgcccgccggcctcaccggatcgaacccgatgacgacctgcacc
agcggcgccgtcacactggccggcgacacgctgagcctgtccggcgcgacgctgaatgcg
agcacttcgtgcacggtgtcgatcaccgcctcgtccgccacgccgggcaattacagctat
acgagcggcacggtctcggcctccggcccagcccccgtgtcgggtagcacagcaacgacg
ccgaccccgctcaccgtcacagcgcccgcgccaacggtgacgtccgtggcgccgacatcc
ggcccaaccgccggcgggacaaccgtcatcgtcaggggcaccgattttaccggcacgacg
ggtccgggcggcgtgcgcttcggcggaaccaatgcgacgagctacacggtcgacggcgat
acgcagatcacggcagttgcgccggctggtggcgcaggcgtggtcgatgtcactgtcacc
gcgccgggcggcaccagcacaacgagcgccgccgaccagttcacctatgtcgcggcaccg
gtcgccagttcgttcaccgcttcggcgctcgcttatgatgtcagcggcacgaacttcagc
atcgctgcccatgcgacgaacagcccgaccagctatgcggtgggctcggcgaccacagcc
cagggcggtttggtatcggtcgatgcggccggcctcgtcacctacagcgcgccggtcggc
ttccgtggcaatgacagcttcactttcaccgcgaccaatctgggcggcacctccagcccg
gcgacggtcaccgtgccgatcagcaacccggtgctggtgtccgtcttccctgtcggcggc
ggccagcgcggcattgcgctttcgggcgtgcagatcaacaccaccggcggcaggtcgccg
cacagctgcgcgaccacgctgaacacgggcgctctgcctgccggcacgcagctcaacagt
gattgcacgatcaccggcacgccggcggcaagcggcacctttaccttcaccgccagtgtg
accgacagctcgctcggcaccggccccttcacccaggcaactggtccgcttgtgctgacc
atctccgcgccgacgatcacgctgtcgccggctgcaggcgcgctgcccggtggctcggtc
ggcaccgcctattcgcagagcttcacggcggggggcggcacctcctcctacaactatgcg
cagacgttgggggacttgccaacgggcctcaccctgaccggcggcacgctgtcgggaacg
ccgaccgcaaccggtaccttcaatttcgatatcacggcaaccgacagttcgagcgcgggc
agcggcgggccgtacaccagggtgcagtcctacagcatcaccatggtccagggcggccag
acgatcagcttcggcgcgctgcccaatgcctcgctttcggcctcgccactgaccttgtcg
gcaacggcgtcgtcgggcctggcggtcggcttctcctcgacgaccacgagcatctgcacg
gtctcgggcgtcacgctcaccctgctccagacaggcacctgctcgatcaccgccagccag
gcgggcgacactgactggaatgcggcgagcgacgtcgtgcagagcttcaccgtgaccccg
gccaatctggtgctcagcacgggcggcgtgtcgggcaaccaggtgggcgccagttacagc
cagtccaacacggcctcgggcggcatcgcgccttatgcatatgcgcttgacgccggggct
ttcgtgccgggcaccagcctcgatcaggacaccggcctggtgtcgggcacgccgatcatt
gccggcaccttcagctaccttgtcagggtgaccgacagccaaggcacgcccgtcaccgcc
atcggctcgatcaccacgacgacgatcgccaagggcgaccagacggccagcttcacgtcg
accgcgcccagcggcgcggccgtgggcggtgccgcctacaccgtgaccgcgacggcgacg
tccgggcttggggtggtcttctcgctcgacggcgccagcaccggctgcgcattgtcgggc
aactcggtcaccttcaccagcaccggcacctgccagatcaacggcaaccagccgggcgat
acgaactggaacgcggcgccgcaggtccagcagagcttcacggtcgggccggccgcggca
atcaccgcgtcggtcacctttgcgccggccactatgggcgctggcgagaccggggtggtc
acgatcaccttcaccaacaccaatgcgtccaacagcccggctttcaacgcgctgctcacc
tctccgtcgctcaccgagcgggtggccggcgacccgggtggcacctgctcgctcggctcg
gcctcggtcccgaccgcgacgaccgtccagttcggcgacatcgtcgtggcgccgggcagc
tgcaccatcacgctcagttataccggcgccaccgccggctcgacctcgggcttcaccctc
ggcgccttcaccccgggtggctacccgaccacatccgcgaccgccggcaacgccttcgcg
gtggtgccgacggtgaccggcgtgtcgccgccttcgggacccgtcagccaggtggtgacg
gtctccggcaccggcttcagcacgacgccgggcaacaatatcgtgatgttcggcaccgtg
gccggcaacgtgaccgcggcgagcgcgacctcgctcaccgtcaccgcgcctgccaccgga
tcgggtccggcgaccgttacggtcaccgccaacggccagaccagcaccggctccgcgacc
ttcactttcatcgacaagccggtcgcggcggacaggcccggcgtggtcgtcgccttcaac
agccccggcacggcgatcgacctgtcgggctccatctccggtggcccgcacagcagcatc
gcgatcggcacggctgcggcccacggcacgacgtcgatcgccggcgatgtcgtgacctac
accccggccaccggctatgccgggcctgacagcttcacctatacggcgaccggtgccgga
ggcacgtccaaccccggcaccgtctcgatccaggtgagcgttgcggttccgactgcggag
ccgctcacgatcaacgcgctgtccggtcgcatggtcaccgtcgatctcacgggcggcgcg
gccggaggaccgttcaccggcggcgcgatcgtgtcgatcaccccggccgataccgccgac
gtgcaactcatcgagggcgggacggcggcgaaccgcacctacagcctgcaattcacctcc
cgcaccaaaacggagcaggcggtgaccgtgctctacaccctgagcaatgccggccgcacg
tcggcgccgctcactttgaccttccaggtcggcgcgcggaccgatccgtcggacgacccc
gaagtgcgcgggctcgaggctgccgagacgggcgctgcccgccgtgcggccgagacgcag
atccgcaatttcggccgccgcatggagcagttgcacgacggtcgctgtacgcagggcatg
ggcgcgagcctcagccttggcgtcccgatgtcggacaacgcggcgccgcagcagcaggtc
gatgacgacccgacccagcctgagcgtatcggctccgccggcggaacggcgagcgacagc
acgcccgcaatggccggcgcggacagtcaggacccggccgtcaactgtgacctgcgcgat
ccgggcaatatcgagctgtggaccaacggcaccgtgacgatcggcagccgcgatgcgacc
agcggtgtggatcggttcgacttctcgacctccggccttaccgctggcgcggacatcgtc
ctggcccccggcgtcaccttcggcgtcggcgtcggcgtcggccgtgaccagaccgatgtc
ggcgacaatgggtcggaggtccaggcaagctcctgggccgtcggcgcctatggcagcttc
cggcccgtcgaggacgcgttcatcgacgtcttggccggcgtcggcgggatcgacttcgat
ctcacgcgctacgtgaccgacaccggcggcttcgccacggcgcagcgcgataccgacctg
ctgttcggatcggtccgcgccggcatcgaccgcaatgacgggcccctgcgctggtcgctg
ttcggcgggatcgaggcgtcgcgtaccaacttcgactcctatgtcgaggacgggccagag
agctactccctcacctatgacgagcgggagatggattcgatcaacggcctcctgggcgga
cgcttcgaatacagcttcctgtcgggccacaccgtcctgaccccgcgcggccggttcgaa
tatcgctatgctttcgaacaggccgaggggcagcgcgtgcggttcagcgactggctgacc
gggccgtcttacctgatcgatgccgacggctggtcgcgcagcgaggtgacggtggaggtc
ggcatcggtgccgcgctcccgatgggctggcagatgggaggcgatgtcaccggcgacctg
tcgggtaacagccggtcaatggggctgcggctggaaatctcgcgggacttctga
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