Nordella sp. HKS 07: G5V57_27840
Help
Entry
G5V57_27840 CDS
T06462
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
noh
Nordella sp. HKS 07
Pathway
noh03030
DNA replication
noh03430
Mismatch repair
noh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5V57_27840 (dnaE)
03430 Mismatch repair
G5V57_27840 (dnaE)
03440 Homologous recombination
G5V57_27840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noh03032
]
G5V57_27840 (dnaE)
03400 DNA repair and recombination proteins [BR:
noh03400
]
G5V57_27840 (dnaE)
Enzymes [BR:
noh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5V57_27840 (dnaE)
DNA replication proteins [BR:
noh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5V57_27840 (dnaE)
DNA repair and recombination proteins [BR:
noh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5V57_27840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIG51198
UniProt:
A0A6G6X0V3
LinkDB
All DBs
Position
5912945..5916391
Genome browser
AA seq
1148 aa
AA seq
DB search
MSDESKSSVTFIHLRTHSAYSLAEGALHIKQMAGLTKEMGSPALAITDTGNLFGALEFSD
ALSEKGIQPIIGCTLKVACEEPSPDAVHRQRTGLRKLPSLALLAKDEAGYRNLMKLTSRA
YLDTPDTAEPHLSMEYLAAHSGGLICLTGGPDGPVNEALVQGQQHVARTRMEELAKTFGD
RLYVELQRHGTENEQLAEPGLIDLAYELELPLVATNEPYFAKLDDYAAHDALICIAEGEV
VAAEDRRRLTPEHYFKSPRQMATLFADIPEAIASTVEIARRCAFKVGSQKPILPRYGEGD
EAEELRRQAFDGLANRLKERGLSEGYNEDDYKQRLEFELEVIIKMKYPGYFLIVSDFIKY
AKSKGIPVGPGRGSGAGSLVAYVLTITDLDPLRFKLLFERFLNPDRVSMPDFDIDFCQDR
RDEVIDYVQNKYGKDHVAQIITFGKLQARAVCRDVGRVLQMPYGQVDRLSKMIPMNPANP
VSLAQAIDGEPRLKEERDKDTTVRTMLEIGLKLEGLYRHASTHAAGIVIGDRPLEELVPL
YRDPRSSIPATQFNMKYVEKAGLVKFDFLGLKTLTIIDKAQRLIRQRIPDFDANKIPLDD
LPTFQMLGQGDTVGVFQLESAGMRDAVRQMRADRFEDLIALVALYRPGPMANIPLYCARK
LGREPLEYMHPALEPILKETFGVITYQEQVQQIAKDLAGYTLAQADLLRRAMGKKIKSEM
DAQREHFLKGAVERGIDATVASNIFDACAKFAEYGFNKSHSAPYAYISYQTAYLKANHPV
EFLAASMSLDMGNTDKLQVFRQEAQRIGVKIVPPSINQSQVDFAVKDQAVLYSLSALKNV
GSGAIQHLVEKREAEGPYTTLGDFARRIDAHMLNRRALESLVKAGAFDELQPNRAQVFDG
VDAILAMANRTTAEAEAGQHDLFGQGSGRKEDVALPAREGWLPMDRLTQEFEAVGFYLSG
HPLDDYMTRLTRMGVDTWTSFHAKALTKGATAAKLAGTVTHRQERRSKSGNKFAFVGFSD
PTGQFETICFSDTLAVTRDLLEPGKAVIARVEADVDGEEVRLRLQGVEDIERAAAQITSG
LTIFLRDAKPIDSIAQRLTNGGKAPVRLVLQMDRGREVEMVLGNKFTVTPQIKGAIKAIS
GVIDVQDL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagtcgaaatccagcgtgaccttcatccatctgcgcacccattccgcctat
tccttggcggaaggcgccttgcatatcaagcagatggcggggctcacgaaggagatgggg
agccccgcgctcgccatcaccgacaccggcaatctgttcggcgcgctcgaattctccgac
gctctgagcgagaagggcatccagccgatcatcggttgcacgctcaaggtcgcctgcgag
gagccgtcgcccgacgcggtgcaccgccagcgcacaggcttgcgcaaattgccgagtctg
gcgctcctcgccaaggacgaggcgggctatcgcaacctgatgaagctcacgagccgggcc
tatctcgatacgcccgacacggccgagccgcatctgagcatggaatatctggccgctcat
tcaggcggcctcatctgcctgaccggcgggcccgacggtccggtgaacgaagcgctcgtc
caggggcagcagcacgtggcgcgtacccgcatggaggagctcgccaagactttcggcgac
cggctctatgtcgaattgcagcgtcacggcaccgagaatgagcaactcgccgagcccggc
ctcatcgatctcgcctacgagctggagttgccgctcgtcgcgaccaacgagccatacttc
gccaagctcgacgactatgccgcccatgatgcgctgatctgcatcgccgagggtgaggtc
gtcgccgccgaagaccggcgccggttgacgcctgagcactatttcaagtcgcccaggcag
atggcgacgctcttcgccgacattccggaagcgatcgcctcgacggtggagatcgcccgg
cgctgcgccttcaaggtcgggtcgcagaagccgatcctgccgcgctacggcgaaggcgac
gaggcggaggaattgcgccgccaggctttcgacggcctcgccaaccggctcaaggaacgc
ggcctgtcggaaggctacaacgaggacgactacaagcagcgtctcgaattcgagctcgaa
gtcatcatcaagatgaaatatccgggctacttcctgatcgtctcggacttcatcaaatac
gcgaaatcgaaaggtatcccggtggggccgggccgtggttcgggtgcgggctcgctcgtc
gcctatgtgctcaccatcaccgatctcgatcccttgcgcttcaagctcctcttcgagcgc
ttcctcaatcccgaccgcgtctcgatgccggacttcgatatcgatttctgccaggaccgg
cgcgatgaggtgatcgactacgtccagaacaaatacggcaaggatcacgtcgcccagatc
atcacattcggtaagctgcaggcgcgcgccgtctgtcgcgacgtcggtcgcgtgctgcag
atgccctacggccaggtcgaccgcctgagcaagatgatcccgatgaacccggccaatccg
gtgtcgctggcgcaggcgatcgacggcgagccgcgcctcaaggaggagcgcgacaaggac
accacggttcgcaccatgctggagatcggcctcaagctcgagggcctttaccggcacgcc
tcgacgcatgccgccggcatcgtgatcggcgaccggccgcttgaggagctggtgccgctc
tatcgcgacccgcgctcatcgatccccgccacccagttcaacatgaaatatgtcgagaag
gcgggcctcgttaagttcgacttcctcggcctcaagacccttactatcatcgacaaggcg
cagaggctcatccgccagcgcattcccgatttcgacgccaacaagatcccgctcgatgac
ctgcctaccttccagatgctgggccagggcgacacggtcggcgtgttccagctggaaagt
gctggcatgcgcgatgcggtgcgccagatgcgcgccgaccgcttcgaggacctgatcgca
ctcgtggcgctttaccgtccgggtccgatggccaatatcccgctctattgcgcccgcaag
ctcggccgcgagccgctcgaatacatgcatcccgcgctcgagccgatcctgaaggagact
ttcggcgtcatcacctatcaggagcaggtgcagcagatcgccaaggaccttgccggctac
acgctggcgcaggccgatcttctgcgccgcgccatgggtaagaagatcaagtcggagatg
gatgcgcagcgcgaacacttcctcaaaggcgcggtcgagcgcggcatcgatgccacagtc
gccagcaacattttcgacgcctgcgcgaaattcgccgaatacggattcaacaaatcgcac
tccgcaccttacgcctatatcagctaccagacggcctatctgaaggcgaaccacccggtc
gaattcctcgccgcctcgatgtcgctcgatatgggcaataccgacaaactgcaggtcttc
cgccaggaggcgcagcgcatcggcgtcaagatcgtgccgccctcgatcaaccagtcgcag
gtcgatttcgcggtgaaggatcaggcggtcctctattcgctctcagctctcaagaacgtc
ggctcgggcgccatccagcatctggtcgagaagcgcgaagcggaagggccgtacacgacg
cttggcgatttcgcgcgccgcatcgatgcccatatgctgaaccggcgcgccctcgaaagc
ctggtcaaggcgggcgctttcgatgaattgcagccgaaccgtgcgcaggtcttcgatggt
gtcgacgccattcttgccatggccaaccgcaccacggcggaagccgaggccggtcagcat
gatctcttcggccaggggtcgggccgcaaggaggatgtcgcattgccggcgcgcgagggc
tggctgcccatggaccgtctcacccaggaattcgaggcggtgggcttctatctctccggc
catccgctcgacgattatatgacgcggctcacacgcatgggcgtcgacacctggacgtca
ttccacgccaaggcgctgaccaagggggccaccgcggcgaagctcgccggcaccgtcacc
catcgccaggagcgccgctccaagtccggcaacaaatttgctttcgtcgggttctccgac
ccgaccggccagttcgagacgatttgcttctccgacacactggccgtcacgcgcgatttg
ctcgagcccggcaaggcggtgatcgcccgcgtcgaggccgatgtcgacggcgaggaggtg
cggctgcggcttcagggcgtcgaggatatcgagcgtgccgcagcccagatcacctcgggg
ctgacgatcttcctccgggatgccaaacctatcgattccatcgcccagcgcctgaccaat
ggcggcaaggcgccggtccggctggtgctgcagatggatcggggcagggaagtcgagatg
gtgctcggcaacaaattcaccgtgacgccgcagatcaagggcgccatcaaggcgatctcc
ggcgtgatcgacgtgcaggatctgtga
DBGET
integrated database retrieval system
