Nordella sp. HKS 07: G5V57_31965
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Entry
G5V57_31965 CDS
T06462
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
noh
Nordella sp. HKS 07
Pathway
noh03420
Nucleotide excision repair
noh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5V57_31965
03430 Mismatch repair
G5V57_31965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noh03400
]
G5V57_31965
Enzymes [BR:
noh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5V57_31965
DNA repair and recombination proteins [BR:
noh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5V57_31965
MMR (mismatch excision repair)
Other MMR factors
G5V57_31965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_25
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QIG51917
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All DBs
Position
6740604..6742949
Genome browser
AA seq
781 aa
AA seq
DB search
MTSRPIDLGDFEEVPPPQRPGGLSARALAGAEPPYLKGLNPEQRAAVETTDGPLLVLAGA
GTGKTRVLTTRLAHILATGRAWPGQILCVTFTNKAAREMRERIGHLIGGVVEGMTWLGTF
HAIGVKILRSHAELAGLKSGFSILDTDDQIRLLKQIIEASGIDEKRWPARQLASLIDNWK
NRGLLPAKVPAGEAHAYGNGRGAELYAEYQARLRVVNAVDFGDLLLEVLHIFQDHPDVLK
EYQRRFKYMLVDEYQDTNVAQYLWLRLLAQGHRNICCVGDDDQSIYGWRGAEVDNILRFE
KDFPGAKVIRLERNYRSTPQILGAASGLIAKNESRLGKTLRSERDDGDQIALRSHWDGDE
EARAIGEDIEQLQRKGEKLNDMAILVRASFQMRAFEDRFITLGVPYRVVGGPRFYERQEV
RDALAYFKITASPDNDLAFERIINVPKRGIGDTSVKRMHEHARKDGVSLYRAAEVLSQTD
ELPAKTRTSLRTLLESFARWRQTLQGLPHTELAEIILDESGYTTMWQNDKSPEAQGRLEN
LKELVRSMGEFETMAGFLEHIALVMDTDANNSEDKVNIMTLHSAKGLEFGTVFLPGWEEG
LFPHQRSLDENGRAGLEEERRLAYVGITRAKRRATISFAQNRRVHNLWQSSLPSRFIDEL
PEAHVEVAPMANSYGGYGIGSYGTSRFEERTTPFSNTYDTPGWQRAQRAYAKGEAMRSSP
HIIEGQLVARETEGKNIARGARVFHQKFGYGRVSHVDGNKLTIDFDKAGEKRVLDSFIEL
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcgtcccattgatctaggtgatttcgaggaagtcccgccgccccagaggccc
ggcggtttgtcggcgcgcgccctggcgggggccgagcccccctatctcaaaggcctcaat
ccggaacagcgcgcggcggtcgagacaaccgacgggcctcttttggtgctggcgggtgcc
ggcacgggcaagacccgtgtcctgaccaccaggctcgcccatatcctggccaccggccgg
gcctggccgggccagatcctgtgcgtgaccttcaccaacaaggccgcgcgcgagatgcgc
gagcgcattggccatctgatcggcggcgtggtcgagggcatgacctggctcggcaccttc
cacgccataggcgtcaagatcctgcgctcccatgccgaactcgccggtctcaaatccggc
ttctcgatcctcgatacggacgaccagatccgccttctgaagcagatcatcgaggcctcc
ggcatcgacgagaagcgctggcccgcccgccagctggcttcgctcatcgacaactggaag
aatcgcggcctgctcccggccaaggtgcccgccggcgaggcccatgcctatggcaatggc
cgtggcgccgagctctatgccgaataccaggccaggctccgggtcgtgaacgccgtcgat
ttcggcgaccttcttcttgaagttctgcatatattccaagaccatccggacgtcctgaag
gagtatcagcgccgcttcaaatacatgctggtcgacgagtatcaggacaccaatgtcgcc
caatatctgtggctgaggctgctcgcccagggccacaggaatatctgctgcgtcggcgac
gacgaccagtcgatctatggctggcggggcgccgaggtcgacaatattctgcgctttgag
aaggatttccccggcgccaaggtgatcaggctcgagcgcaattaccgctcgacaccgcag
attctcggcgccgcgtcgggcctcatcgccaagaatgagagccgcctcggcaagacgctc
aggagcgagcgcgacgacggcgaccagatcgctttgcgctcgcactgggacggcgatgag
gaagcccgcgccatcggcgaagatatcgagcaattgcagcgcaagggcgagaagctcaac
gacatggcgatcctggtgcgcgcctcattccagatgcgcgctttcgaagaccgcttcatc
acattgggcgtcccctatcgcgtcgtcggcggtccgcgcttctatgagcgccaggaagtg
cgcgatgcactcgcttatttcaagatcacggcctcgcccgacaacgatctcgccttcgag
cgcattatcaacgtgccgaagcgcggtatcggtgacacgtccgtcaagcgcatgcacgag
catgcccgcaaggacggcgtctcgctctaccgcgccgctgaagttctgagccagaccgac
gagttgccggccaagacgcgcacctctttgcgcacgctgctcgagtccttcgcgcgctgg
cgccagacgctgcagggcctgcctcataccgagcttgccgagatcatactcgatgagtcc
ggctacacgaccatgtggcagaacgacaagagcccggaagcgcaaggccgcctcgagaac
ctgaaagagcttgtccgctctatgggcgagttcgaaaccatggcaggcttcctcgagcat
atcgcgctggtgatggacaccgatgccaacaacagcgaggacaaggtcaacatcatgacc
ttgcactccgccaagggcctcgaattcggcacggtcttcctgcccggctgggaggaaggc
ctcttcccgcatcagcgctcgctagacgagaatggccgcgccggcctcgaggaggaacgc
cgactggcctatgtcggcatcacccgcgccaagcgccgcgccaccatttccttcgcccag
aaccgccgcgtccacaatctctggcagtcgagcctgccctcgcgcttcatcgacgaattg
ccggaagcgcatgtcgaagtggcgccgatggccaattcctatggcggctatggcatcggc
tcctatgggacgagccgcttcgaggagcgcaccacgcccttctccaacacttacgacacg
ccgggctggcagcgcgcccagcgcgcctacgccaagggcgaggccatgcgatcgtcgcca
catatcatcgagggccagctggtggcgcgcgagaccgagggcaagaacatcgcccgcggc
gccagagtcttccatcagaagttcggctatggccgcgtcagccatgtcgacggcaacaag
ctcaccatcgatttcgacaaggcgggcgagaagcgcgttctcgattccttcatcgagctg
gcctga
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integrated database retrieval system
