Nocardioides jishulii: FCL41_00345
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Entry
FCL41_00345 CDS
T06163
Name
(GenBank) DEAD/DEAH box helicase
Organism
noi
Nocardioides jishulii
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCX26162
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Position
77820..80534
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AA seq
904 aa
AA seq
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MSLVPTSGPATLRSAEPPREATIEFTGPGQRTVTLPVTAAMPVLARAQRGGGELHPTVVL
LAGAAHLGLRLVADGRFGPHPEQPWWVPVLLPADDDRIAQLAAARADDGLDPAAAEGVVR
RMVDAVVDASPRKAPSRTQVRQPASPVDYSSRLQSRLQRIRRTHGVDDRPQTVTLSLRVE
AADEQLYAGELRLVPQVHAEENPLHLADASALWLETGPDASHGFGDRARTHASIAIRRAA
DAWDVLDRLLDQRVPDELVLDSDEITSLLDRGLDALAEVGVDVLWPRSIGRDLSSRAVVE
STSSRGFDDDPLQSSTLSAENLFAFKWQVSLRGEELSEAEMEQLAKAATPVIKLRDNWVV
VDPTTARRARKRLIRNARPAEAVAAALSGVVEVDKTEVQVHPGASIEVVRKRLLEAHQAT
VEVPKKLAATLRDYQHQGLSWLAHVTGLGLGAVLADDMGLGKTITLIALHLHRREAGFDG
PTLVVCPASLLGNWQAEIERFAPGTPVRRFHGGGRSLEGLAGERPTGEGDAGFVLTTYGT
MRNDAETLASVRWDLVVADEAQHVKNAASSTARALRSIDSRARVALTGTPVENNLTELWA
ILDWVVPGLLGSRLAFRRVWASPIEAGVDSKVTQRFADLIGPFLLRRRKSDPGIAPELPP
KTETDHLLGLTTEQAVLYESFVKDRMERIERSEPEERRGLVLAMLTGLKQICNHPAQFLK
QANPKLNGRSEKLDLLDELIGTVLAEDGAVLVFTQYVAMGNLISTHLRRAGVPHQFLHGS
VPVAEREQMVRRFQADDADDRVPVFLLSLKAGGTGLNLTRADHVVHVDRWWNPAVEEQAT
DRAYRIGQTKPVQVHRMVTQGTVEERIAALLERKRGLADAVLGQGEAALTELSDDELRDL
VALR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctcgtccccacctccggtcctgcgaccctgcgctcggcggagccgccgcgggag
gcgacgatcgagttcaccggtccgggtcagcgcacggtcaccctgccggtcaccgccgcg
atgcccgtcctggctcgcgcccagcgcggaggcggcgagctgcaccccaccgtcgtcctg
ctcgcgggagccgcccacctcgggctgcgcctggtcgccgacggccgcttcggaccgcac
cctgagcagccgtggtgggtgccggtgctgctgccggccgacgacgaccgcatcgcgcag
ctcgccgccgcccgggccgacgacgggctcgacccggcagcggcggagggcgtcgtacgc
cgcatggtcgacgccgtcgtcgacgccagcccgcgcaaggcaccgagccgcacgcaggtg
cgtcagcccgcctcgccggtcgactactcctcgcgcctgcagtcgcgcctgcagcggatc
cgccgcacccacggcgtcgacgaccgcccgcagaccgtcacgctctcgctgcgggtcgag
gccgccgacgagcagctgtacgccggtgagctgcgcctggtgccgcaggtgcacgccgag
gagaacccgctgcacctcgccgacgcctcggcgctctggttggagaccgggcccgacgcc
tcgcacggcttcggcgaccgggcgcgtacgcacgccagcatcgcgatccgtcgcgctgcc
gacgcctgggacgtgctcgaccggctgctcgaccagcgggtgcccgacgagctcgtcctc
gactccgacgagatcacctccctgctcgaccgcggcctcgacgcgctggccgaggtcggg
gtcgacgtgctgtggccgcgcagcatcggccgcgacctgagcagccgggccgtggtggag
tcgacctcgtcgcgcggcttcgacgacgatcccctgcagtcctccaccctctcggccgag
aacctcttcgccttcaagtggcaggtctcgttgcggggcgaggagctgtccgaggccgag
atggaacagctcgccaaggcggccacaccggtcatcaagctccgcgacaactgggtggtc
gtcgacccgaccacggcccgtcgcgcccgcaagcgcctgatccgcaacgcccgcccagcc
gaggcggtcgccgccgcgctcagtggcgtggtggaggtcgacaagaccgaggtgcaggtg
caccccggtgcctcgatcgaggtggtgcgcaagcgcctgctcgaggcccaccaggcgacg
gtcgaggtgccgaagaagttggcggccaccctgcgcgactaccagcaccagggcctcagc
tggctcgcccacgtcacgggcctggggctgggtgccgtgctggccgacgacatggggctg
ggcaagacgatcacgctcatcgcgctgcacctgcaccgccgcgaggccggcttcgacggc
ccgaccctggtggtctgcccggcctccctgctcggcaactggcaggccgagatcgagcgg
ttcgcgcccggcacgcccgtacgccgcttccacggcggaggccgctcgctcgaggggctg
gccggggagaggccgacgggcgagggcgacgccgggttcgtgctgacgacgtacggcacg
atgcgcaacgacgcggagaccctggcgtcggtgcggtgggacctcgtcgtcgccgacgag
gcgcagcacgtgaagaacgccgcctcctcgaccgcccgcgccctgcgcagcatcgactcc
cgggcgcgggtcgcgctgaccggaaccccggtggagaacaacctcaccgagctctgggcg
atcctcgactgggtggtgccgggactgctcggcagccgcctggcgttccgccgggtctgg
gcctcgcccatcgaggccggggtcgacagcaaggtcacgcagcgcttcgccgacctgatc
gggccgttcctgctgcggcggcgcaagtccgacccgggcatcgcgccggagctgccgccc
aagaccgagaccgaccacctcctggggctgaccaccgagcaggcggtgctctacgagtcg
ttcgtgaaggaccggatggagcgcatcgagcgctccgagcccgaggagcgccgcggcctg
gtgctggcgatgctcaccggcctcaagcagatctgcaaccacccggcccagttcctcaag
caggccaaccccaagctcaacgggcgctcggagaagctcgacctgctcgacgaactgatc
ggcacggtgctcgccgaggacggcgcggtcctggtcttcacgcagtacgtcgccatgggc
aacctgatctccacccacctgcgccgcgcgggggtgccgcaccagttcctgcacggcagt
gtcccggtggccgagcgcgagcagatggtgcgtcgtttccaggccgacgacgccgacgac
cgggtgccggtcttcctgctctccctcaaggccggcggcaccggcctcaacctgacccgg
gccgaccacgtcgtgcacgtcgaccgctggtggaacccggccgtcgaggagcaggccacc
gaccgcgcctaccggatcggtcagaccaagcccgtccaggtgcaccggatggtcacccag
ggcacggtggaggagcggatcgcggcgctgctggaacgcaagcgcggcctcgccgacgcg
gtgctgggccagggcgaggcggcgctgaccgagctcagcgacgacgagctgcgcgacctg
gtggcgctgcgatga
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