Nocardioides jishulii: FCL41_02935
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Entry
FCL41_02935 CDS
T06163
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noi03016
]
FCL41_02935
Enzymes [BR:
noi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FCL41_02935
Transfer RNA biogenesis [BR:
noi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FCL41_02935
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QCX26616
LinkDB
All DBs
Position
complement(630684..632030)
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AA seq
448 aa
AA seq
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MTSDDATGTEPTEPVPTGEETEGETAPPPPPVPLLTLSGGIPDVVDTPSRLEEACAALAA
ATGPIALDAERASGYRYSQRAYLIQLRRGDSGTWLIDPIAFNSDLPTLAEAMGDAEWILH
AATQDLPCLREVGLEPTTIFDTELAGRLLGMPRVGLATLVEEVVGLRMRKEHSAADWSKR
PLPTPWLEYAALDVEVLAELRDHMQSELVKAGKWEWAQQEFTHLLDFQPTVRVDAWRRTA
GLHKLRGRRALAVARALWETRDEIARTRDVTPGRVVPDAALVAAAAAMPANRNALLATRG
FNGRGAERYANRWMDAIATAMQIPEEELPPRTLRGDGPPPVKAWADRDPVADRRYKVARD
ATLSIAAEHHLPVENLITPDHVRRAMWTPPATRDPQLLAQQLRRQLSGYGARRWQVDLVL
DALVEATVLADQEPPVVPDGPDDESTEA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgacgacgcgacaggcaccgagccgacggagccggtcccgacgggcgaggag
accgagggcgagaccgcccctcccccgccccccgtacccctgctcacgctgagcggcggc
atcccggacgtcgtcgacaccccctcgcgcctggaggaggcctgcgctgccctggcggcg
gccaccggccccatcgccctggacgccgagcgcgcctccggctaccgctactcgcagcgg
gcctacctgatccagctgcggcgcggcgactccggcacgtggctgatcgaccccatcgcc
ttcaactccgacctgccgacgctggccgaggccatgggcgacgccgagtggatcctgcac
gcggcgacccaggacctgccgtgcctgcgcgaggtcggcctggagcccaccacgatcttc
gacaccgagctcgccggtcgcctgctcggcatgccccgggtcggcctcgccaccctggtc
gaggaggtcgtgggcctgcggatgcgcaaggagcactccgccgccgactggtcgaagcgt
ccgctgccgactccgtggctggagtacgccgccctcgacgtcgaggtgctcgccgagctg
cgcgaccacatgcagtccgagctcgtgaaggccggcaagtgggagtgggcccagcaggag
ttcacgcacctgctggacttccagcccaccgtccgggtcgacgcgtggcggcgtacggcg
ggcctgcacaagttgcgcggacgccgtgccctcgcggtggcccgggccctgtgggagacg
cgtgacgagatcgcccgcacccgcgacgtgacgcccggccgggtggtccccgacgccgcg
ctggtcgccgcggcggccgcgatgccggccaaccgcaacgccctgctggccacccgcggc
ttcaacggacgcggcgccgagcgctacgccaaccgctggatggacgcgatcgcgacagcg
atgcagatcccggaggaggagctgcccccgcgcaccctgcggggcgacggccccccgccc
gtcaaggcgtgggccgaccgcgacccggtcgccgaccgccgctacaaggtggcccgcgac
gcgacgctctccattgccgccgagcaccacctgccggtcgagaacctgatcacgcccgac
cacgtacgccgcgcgatgtggacgccgcccgctacccgcgacccgcagctgctggcgcag
cagctgcgccggcagctcagcggctacggcgcgcggcgctggcaggtcgacctcgtcctc
gacgcactcgtcgaggcgacggtgctcgccgaccaggagccgccggtcgtccccgacggg
ccggacgacgagtcgaccgaggcctga
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