Nocardioides jishulii: FCL41_04220
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Entry
FCL41_04220 CDS
T06163
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
FCL41_04220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6203
Motif
Other DBs
NCBI-ProteinID:
QCX26834
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All DBs
Position
complement(885250..888327)
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AA seq
1025 aa
AA seq
DB search
MGSLASFSLRNRAFVALATVIVAIFGGVALGSLKLELIPNLQFPLVGVVAPYAGASPEAV
EQEVTVPIEEAVAGVDGLDSVSSTSSSGAATVLVSLDYGTDLDRAVQQVESAMVGLRTLP
ESVDPVVFAGDISQVPIVQLSITSDRSPSELADELEQVAVPEFSDIEGVREVQLSGAPTN
RVEITLKPQAAAEGVTGQQVSDALKAAQMVPAGSLDDGDRALSVQVGTTPTSLAELKQVP
VKVGEGTRPLGTLAQVKVGQAAPTSYARTNGDPSLSLAVTKTPDGNTVDISHAVNELIPE
LEEKMGDGTEFSVAFDQAPFIEKSVEDLTTEGGLGLIFAIFVILVFLHSLRSTIVTAISI
PLSLLVTLIGLWVGGYSLNILTLGALTVAIGRVVDDSIVVIENIKRHLAYGEGKIQAIVT
AVREVAGAITSSTIATAAVFLPIGVVGGQVGELFRPFAITVSLALLASLLVALTIIPVLA
YWFLKEPQPADEAEAAELRAKAEESDDRTWLRRAYDPVLRWSLRKPWLVVTMAFVILLGT
VGLAFTPYLKTNFLGDTGQNTLSINQELEAGASLARQDAAAREVEKIVDGVDGVETVLTT
VGGDPLMAAFTGGSGTSFSVTLSDDADATEVTDELRTKLEDADGDIQVGGGQGGGFSSAI
DVVVTATEQQNLLEAADQVQSALEKVDGIGELTSDASPAQPILSVAARPQAQAAGLTSPV
IGGLLAQTLFQPPVGRVSIDNEQMDVVLLAGPKPTSVKQLEQLPVGPGGTLGQVAEVEER
KVAASITRQDGDRTVTISADPSSDDLRTLTADITTVLDDLDLPEGTDVTIGGVAEDQAEA
FAQLGLALVVAIAIVYMVMVGTFNSLVQPLILLVSVPFAATGALLLLVVTGVPLGVASLI
GALMLIGVVVTNAIVLIDLVNQRRNAGDGIVEALTEGGGKRLRPIVMTALATILALTPMG
LGVTGGSAFISQPLAIVVIGGLLSSTVLTLVLVPVLYLLVERRRERRAERRSKKQAAKQA
EAATA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
gtgggctcacttgcctcgttctccctgcgcaaccgcgccttcgtcgcccttgccacagtc
atcgtcgccatcttcggcggcgtggccctcggctcgctcaagctcgagctgatccccaac
ctccagttcccgctcgtcggcgtggtggctccctacgcgggcgcctcccccgaggcggtg
gagcaggaggtcaccgtgcccatcgaggaggcggtcgccggggtcgacggactcgactcg
gtcagctcgacctcctcctcgggcgcggccaccgtgctggtcagcctcgactacggcacc
gacctcgaccgtgccgtgcagcaggtcgagagcgccatggtcgggctgcggaccctgccg
gaatcggtggaccccgtcgtcttcgccggtgacatctcccaggtgccgatcgtgcagctc
tcgatcacctctgaccgctcgcccagcgagctggccgacgagctcgagcaggtggccgtc
cccgagttcagcgacatcgagggcgtgcgcgaggtccagctcagcggagcaccgaccaac
cgggtcgagatcaccctcaagccgcaggccgcggccgagggcgtgaccggccagcaggtc
tccgacgcgctcaaggcggcgcagatggtgcccgccggcagcctcgacgacggcgaccgg
gcactctcggtccaggtcggcacgacgcccacctcgctggccgagctcaagcaggtgccg
gtcaaggtcggcgaggggacgcgtcccctcggcacgttggcgcaggtcaaggtcggtcag
gccgcgcccacctcgtacgcccgcaccaacggtgaccccagtctctcgctggccgtcacc
aagacccccgacggcaacaccgtcgacatctcccacgccgtcaacgagctgatccccgag
ctcgaggagaagatgggcgacggcaccgagttctcggtcgccttcgaccaggcccccttc
atcgagaagtccgtcgaggacctcaccaccgagggcgggctcggcctgatcttcgcgatc
ttcgtgatcctggtcttcctgcactcactgcgctccaccatcgtcaccgcgatctcgatc
ccgctgtcgctgctggtcaccctcatcggcctgtgggtcggcggctacagcctcaacatc
ttgaccttgggtgcgctgacggtcgcgatcggccgcgtggtcgacgactccatcgtggtg
atcgagaacatcaagcgccacctcgcctacggagagggcaagatccaggcgatcgtcacg
gcggtccgcgaggtcgccggagcgatcacctcctccaccatcgcgacggcggcggtcttc
ctgccgatcggcgtggtcggcggtcaggtcggagagctcttccgtccgttcgcgatcacc
gtctcgctggcgcttctcgcctccctcctcgtggccctgacgatcatcccggtcctcgcc
tactggttcctcaaggagccgcagccggcggatgaggccgaggctgccgagctgcgcgcc
aaggccgaggagagcgacgaccgcacctggctgcgtcgcgcctacgaccccgtcctgcgc
tggtcgctgcgcaagccgtggctcgtggtcacgatggccttcgtgatcctgctgggcacc
gtgggcctcgccttcacgccctacctgaagacgaacttcctcggcgacaccggccagaac
accctctcgatcaaccaggagctcgaggccggtgcgagcctggcccgccaggacgccgcg
gcccgcgaggtcgagaagatcgtcgacggggtcgacggcgtcgagaccgtcctcaccacc
gtcggcggcgacccgctcatggccgccttcacgggcggctcgggcacctccttctcggtg
accctcagcgacgacgccgatgccaccgaggtcaccgacgagctgcgtacgaagctggag
gacgccgacggcgacatccaggtcggcggcggtcagggcggcggcttctcctccgccatc
gacgtcgtggtcaccgccaccgagcagcagaacctgctcgaggcggccgaccaggtccag
tcggcgctcgagaaggtcgacggcatcggcgagctcacctcggacgcctcccccgcccag
cccatcctctcggtcgcggcgcgtccgcaggcccaggcggccggcctcacctcgccggtg
atcggcggactcctcgcccagacgctcttccagccgccggtgggccgggtgtcgatcgac
aacgagcagatggacgtcgtcctgctggccggcccgaagcccacctcggtgaagcagctc
gagcagctgcccgtcggcccgggcggcacgctcggccaggtggccgaggtcgaggagcgc
aaggtcgctgcgtcgatcacccgtcaggacggtgaccgcacggtcaccatctcggccgac
ccgtcgtcggacgacctgcgcaccctgaccgccgacatcaccacggtgctcgacgacctc
gacctgcccgagggcacggacgtgacgatcggcggcgtggccgaggaccaggccgaggcg
ttcgcccagctcgggctggcgctcgtggtggccatcgcgatcgtctacatggtcatggtc
ggcaccttcaactcgctggtgcagccgctgatcctgctcgtctcggtgccgttcgccgcg
accggtgccctcctcctcctggtggtgacgggcgtgcccctgggcgtcgcctcgctcatc
ggagcgctgatgctgatcggcgtggtggtcaccaacgccatcgtgctgatcgacctggtc
aaccagcggcgcaacgctggcgacgggatcgtcgaggccctgacggagggcggcggcaag
cgactgcggcccatcgtgatgaccgccctcgccacgatcctggccctgaccccgatgggt
ctgggggtgaccggcggcagcgccttcatctcccagcccctggccatcgtggtgatcggc
ggactgctctcctcgaccgtgctgacgctggtcctggtgccggtgctctacctgctggtg
gagcgtcgccgcgagcgcagggccgagcgacgcagcaagaagcaggcagcgaagcaggcg
gaggcggccaccgcctga
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