Nocardioides jishulii: FCL41_05075
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Entry
FCL41_05075 CDS
T06163
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
noi
Nocardioides jishulii
Pathway
noi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCL41_05075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noi03400
]
FCL41_05075
Enzymes [BR:
noi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
FCL41_05075
DNA repair and recombination proteins [BR:
noi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCL41_05075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCX26970
LinkDB
All DBs
Position
1072546..1073100
Genome browser
AA seq
184 aa
AA seq
DB search
MDLSRNVSHDRRVLNDLLRPDLSVVFCGTAVATASARRGHYYSGPGNKFWQLLHEAGFTP
TRLSPEEDVSLLDHGVGITDLVKNVAQSHDRGLDFSGTPRVAAHLETAAPRWVAFNGLTA
GRAAAAQLGLARRKDVHLGEQPWHVGQSRVFVLPSSSGAHATMPYGEKLAWWRELRSASD
ASPA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtctcgcaacgtgagccacgatcggcgggtgctgaatgatctcttgcgcccg
gacctgtcagttgtcttctgcggcaccgccgtggccaccgcgtcggcccgccgtgggcac
tactacagcgggccaggaaacaagttctggcagttgctgcacgaagcaggcttcacgccg
acgcgactcagccccgaagaagacgtttccctgctcgaccatggtgtggggatcacagac
ctcgtcaagaacgtcgcgcaaagccacgacagaggtctcgacttcagtgggaccccacgc
gttgcggcccatcttgagactgcagcgccacgatgggtggccttcaacggtctgacggca
gggcgggccgcagcggcgcagttggggcttgcccgcagaaaagacgtccacctcggagag
cagccctggcacgtcgggcagagccgggtgttcgttcttcccagcagcagcggggcgcac
gccaccatgccgtacggggaaaagcttgcatggtggcgcgaactacgttctgcctccgat
gcgagccctgcgtga
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