Nocardioides jishulii: FCL41_05480
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Entry
FCL41_05480 CDS
T06163
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
noi03036
]
FCL41_05480 (smc)
Chromosome and associated proteins [BR:
noi03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FCL41_05480 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
DUF2563
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
QCX27041
LinkDB
All DBs
Position
1161469..1165020
Genome browser
AA seq
1183 aa
AA seq
DB search
MYLKSLTLKGFKSFASSTTLQLEPGITCIVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK
MEDVIFAGTSGRPPLGRAEVQLTIDNSDGALPIDYSEVTISRTMFRNGGSEYAINGTFCR
LLDVQDLLSDSGIGREMHVIVGQGQLDSILHATPEDRRGFIEEAAGVLKHRKRKEKALRK
LASTEGNLTRLADLLTEIRRQLKPLGRQAEVARRAQAVQAEVRDARARVAADDLVTARNV
LEQDLADESLLVQRRAEVEAELAKAREVEAGLEASLREDLPALAAAQEAWFALSGLRERL
RGTQSLAAERVRNAQGAADDVVDSGRDPDRLEADAERAREQEATIAAEVEGLRTALEEAV
THRRTAEDAATEEDRRITALQRAAADRREGLARLTGQVNALRSRAAAADEELGRLAQARQ
DALGRAERAAAQFTALETEVAGLDAGEEGLDAEHEAAVEALDAAEAEVERLRAETARADS
DRTALRARLEALALGLSRKDGTGALLAAGEQVDGLLGSVAALVTVHAGYEAAVASALGQA
ADAVVVRDAVAAVAAIGHLKDDDLGRAQMLLAGAEGAARDWPALPGGAVWAIDVVTAPSE
LAGALSRALDHVAVVPDLEAARTLVESIPGVVAVTRDGDLLAPHHASGGSSSQPSLLEVQ
AAHDEAEQLLAEATARAERLGFEVSGAEAVRLEAHKRVDVALAQLHESDATLAAVAEELG
QYGSAARNARAEAERLERAITAATEAREKDLAGLVDLETRLQQAQEAPDTEPDTTAREEL
VEAARAARQAEMDARLALRTAEERARAVHGRADSLLRQARAERDNRAKAQARRQRLVREG
RAAEAVGAAVAVVLHALESSVNEAAEERAAVERSRHQREEQLMAVRARLRDLTRDHDELV
NSVHRDELARAQQRMRIEQLEEKAVDELGLDPQVLVDEYGPHLPVPFFGEVAEGDEAPEP
VAFVREEQLKRLKAAERALTQLGRVNPLALEEFTAMEERHKFLTEQLDDLKRTRKDLMDI
VKEVDLRVEQVFTEAYADVEKAFDATFARLFPGGEGRLVLTDPSNMLTTGVEVEARPPGK
KVKRLSLLSGGERSLVAVAFLVALFKARPSPFYILDEVEAALDDTNLGRLLQIYEELRES
SQLLVITHQKRTMEVGDALCGVTMRGDGVSAVISQRLKEPEPA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagagcctgaccctgaaggggttcaagtccttcgcctcctcgaccacgctc
cagctcgagccggggatcacctgcatcgtcgggcccaacggctccggcaagtccaacgtc
gtcgacgcgctggcctgggtcatgggtgagcagggcgccaagtcgctgcgtggcggcaag
atggaggacgtcatcttcgccggcacgtccggccgtccgccgttggggcgcgccgaggtg
cagctgaccatcgacaactccgacggtgcgctgccgatcgactactccgaggtgacgatc
agccgcacgatgttccgcaacggcggttcggagtacgcgatcaacggcaccttctgccga
ctgctcgacgtgcaggacctgctcagcgactccggcatcgggcgtgagatgcacgtgatc
gtcgggcagggccagctcgactcgatcctgcacgcgaccccggaggaccgtcgcgggttc
atcgaggaggccgcgggcgtcctcaagcaccgcaagcgcaaggagaaggcgctgcgcaag
ctcgcctccaccgagggcaacctgacccgcctggccgacctgctcaccgagatccgtcgt
cagctcaagccgctcggccggcaggccgaggtggcccgccgcgcccaggccgtgcaggcc
gaggtgcgtgacgcccgcgcccgcgtcgctgccgacgacctggtcaccgctcgcaacgtc
ctggagcaggacctcgccgacgagtcgctgctggtgcagcggcgcgccgaggtggaggcc
gagctggccaaggcccgcgaggtcgaggccgggctggaggcgtcgctgcgcgaggacctg
cccgcgctggcggccgcgcaggaggcgtggttcgccctctcgggcctgcgcgagcggctg
cgcggcacccagtcgctggcggccgagcgggtgcgcaacgcccagggcgccgccgacgac
gtcgtcgacagcgggcgtgatcccgaccggctcgaggccgacgcggagcgtgcccgcgag
caggaggcgaccatcgccgccgaggtcgaggggctgcgtacggcgctcgaggaggcggtg
acgcaccgacgtaccgccgaggacgccgcgaccgaggaggatcgccggatcacggcgctc
cagcgcgcggccgctgaccggcgcgaagggttggcccgcctgacgggacaggtcaacgca
ctcaggagccgtgccgccgccgccgacgaggagctcggacgtctggcgcaggcccgccag
gacgcgctgggtcgcgccgaacgcgccgccgcccagttcaccgccctggagaccgaggtc
gccggactcgacgccggcgaggaaggtctggacgccgagcacgaggcggccgtcgaggcc
ctcgacgccgcggaggccgaggtggagcgcctgcgcgccgagaccgcccgggccgacagc
gaccgcaccgcgctgcgcgctcgcctggaggcgctcgccctcgggctgagccgcaaggac
gggacgggagcgctgctggcggccggcgagcaggtcgacggcctgctcgggtcggtggcc
gcgctggtcaccgtgcacgccggctacgaggccgcggtcgccagcgccctgggccaggct
gccgatgccgtggtcgtacgcgacgccgttgccgccgtcgccgccatcggtcacctgaag
gacgacgacctcggtcgcgcccagatgctcctggctggtgcggagggcgcagcccgcgac
tggcccgccctgccggggggagcggtctgggcgatcgacgtcgtcacggctccgagcgag
ctcgcgggagccctgtcccgtgccctcgaccacgtcgctgtggtgcccgacctcgaggcc
gcgcgcaccctggtcgagagcatccccggtgtcgtcgccgtgacccgcgacggtgacctc
cttgctccccaccacgcgtccggaggctcctcgtcgcagcccagcctgctcgaggtccag
gcggcccacgacgaggcggagcagctgctggccgaggcgaccgcccgggccgagcggctc
ggcttcgaggtctcgggcgccgaggccgtccggctggaggcgcacaagcgcgtcgacgtg
gcgctggcgcagctgcacgagtccgacgccacgttggcggcggtcgccgaggagctgggc
cagtacgggtcggctgctcgcaacgcccgggccgaggccgagcgcctcgaacgggcgatc
accgcggccaccgaggcgcgcgagaaggacctcgccggcctggtggacctcgagacccgt
ctccagcaggcccaggaggcccccgacaccgagccagacaccaccgcccgcgaggagctg
gtcgaggccgcccgcgcggcgcgtcaggcggagatggacgccaggttggcgctgcgtacg
gcggaggagcgggcccgggccgtgcacggacgcgccgactcgttgctgcgccaggcccgc
gccgagcgggataaccgggccaaggcccaggcgcggcgtcagcgcctcgtacgcgaaggt
cgggccgccgaggccgtcggggcggccgtcgcggtcgtcctgcacgccctggagtcctcg
gtcaacgaggcggccgaggagcgggccgccgtggaacgctcccgccaccagcgcgaggag
cagctgatggccgtacgtgcccggctgcgcgacctcacccgcgaccacgacgagctggtc
aactccgtgcaccgcgacgagctggcgcgggcgcagcagcggatgcggatcgagcagctc
gaggagaaggccgtcgacgagctcggcctcgacccccaggtgctcgtcgacgagtacggg
ccgcacctgcccgtgcccttcttcggcgaggtggccgagggggacgaggcgcccgagccc
gttgccttcgtccgtgaggagcagctcaagcgactcaaggccgccgaacgtgcgctgacc
cagctcgggcgggtcaacccgctggcgctggaggagttcacggccatggaggagcggcac
aagttcctcaccgagcagctcgacgacctcaagcgcacccgcaaggacctcatggacatc
gtcaaggaggtcgacctccgggtcgagcaggtcttcaccgaggcctacgccgacgtggag
aaggcgttcgacgcgaccttcgcgcgactcttcccggggggagagggccggttggtgctc
accgacccctccaacatgctcaccaccggcgtcgaggtcgaggcgcgcccgccgggcaag
aaggtgaagcggctctcgttgctgtcgggcggtgagcgctcgctggtcgccgtcgccttc
ctggtcgccctcttcaaggcgaggccctcgccgttctacatcctcgacgaggtcgaggcc
gccctcgacgacaccaacctcggtcgcctcctgcagatctacgaggagctgcgcgagagc
tcccagctcctggtcatcacgcaccagaagcgcaccatggaggtcggcgacgcgctctgc
ggcgtgaccatgcggggcgacggcgtctcggccgtgatcagccagcggctgaaggagcca
gaaccggcctag
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