KEGG   Nocardioides jishulii: FCL41_05520
Entry
FCL41_05520       CDS       T06163                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
noi  Nocardioides jishulii
Pathway
noi02024  Quorum sensing
noi03060  Protein export
noi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:noi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FCL41_05520
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FCL41_05520
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FCL41_05520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:noi02044]
    FCL41_05520
Enzymes [BR:noi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FCL41_05520
Secretion system [BR:noi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FCL41_05520
  Eukaryotic Sec-SRP protein
   FCL41_05520
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 CbiA AAA_22 ArsA_ATPase Zeta_toxin ParA APS_kinase AAA_31 AAA_24 MMR_HSR1 AAA_33 AAA_30 Thymidylate_kin AAA AAA_25 AAA_17 Catalase_C ResIII NACHT NPHP3_N MobB AAA_18 AAA_16 TsaE Mg_chelatase 6PF2K DUF4175 SLFN-g3_helicase NB-ARC MeaB
Other DBs
NCBI-ProteinID: QCX27047
LinkDB
Position
1174971..1176521
AA seq 516 aa
MFATLSDRLADTFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVKEFVGAVKERAR
SEEVSQALNPAQQIVKIVNEELVTILGGETRRLRYAKTGPTVIMLAGLQGAGKTTLAAKL
ALWLKEQGKTPILVAADLQRPNAVNQLQVNGGRVGVPVFAPEPGNGVGDPVSVARASIEE
AKRKLHDVVIIDTAGRLGVDTELMKQAADIRDAVQPDEVLFVVDAMIGQDAVNTAQAFLD
GVGYDAVVLTKLDGDARGGAALSIASVTGKPVMFASNGEKMTDFDLFHPDRMASRILDMG
DMLTLIEQAEKAFDADQTSKAAEKLLSGKGDFTLEDFMEQMKQLRKLGSMTKIMGMLPGM
GQYRDQLENFDEREIDRIQAIISSMTPAERQNPKIIDGSRRARIAKGSGTKVNDVNQLVD
RFFEARKMMQQMAKGGMPGMPGMPGLPGAGGGKKGRQAPKKGKSKRVSGNPAKAAQQKKA
LTEKPKAANPFGGDEVDYEAAAANLQLPKDFSKFLK
NT seq 1551 nt   +upstreamnt  +downstreamnt
ttgttcgccacactctccgaccgccttgccgacaccttcaagaacctgcgaggcaaggga
cggctctccgaggccgacatcgacgccacggcgcgtgagatccgcatcgcgctgctcgag
gccgacgttgccctgcccgtggtcaaggagttcgtcggcgccgtcaaggagcgggcgcgc
agcgaggaggtcagccaggcgctgaaccccgcgcagcagatcgtcaagatcgtcaacgag
gagctcgtcaccatcctcggtggtgagacccgtcgcctgcgctacgccaagaccggcccg
accgtgatcatgctggccggtctccagggtgcgggcaagaccacgctggcagccaagctc
gcgctgtggctcaaggagcagggcaagaccccgatcctggtcgccgccgacctccagcgc
cccaacgccgtcaaccagctccaggtcaacggtggccgggtcggtgtccccgtcttcgcg
cccgagcccggcaacggcgtcggtgacccggtctccgtggcccgtgcctccatcgaggag
gccaagcgcaagctgcacgacgtcgtcatcatcgacaccgccggtcgtctcggcgtcgac
acggagctgatgaagcaggccgcggacatccgcgacgccgtccagcccgacgaggtcctc
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaacaccgcgcaggccttcctcgac
ggggtcggctacgacgcggtcgtgctcaccaagctcgacggtgacgcgcgcggtggtgcg
gcgctgtcgatcgcctcggtcacgggcaagccggtcatgttcgcctccaacggcgagaag
atgaccgacttcgacctgttccaccccgaccggatggcctcccgcatcctcgacatgggc
gacatgctcaccctgatcgagcaggccgagaaggcgttcgacgccgaccagacctcgaag
gccgccgagaagctcctctcgggcaagggtgacttcaccctcgaggacttcatggagcag
atgaagcagctgcgcaagctcggctcgatgaccaagatcatgggcatgctgccggggatg
gggcagtaccgcgaccagctcgagaacttcgacgagcgcgagatcgaccgcatccaggcg
atcatctcgtcgatgacgcccgccgagcgccagaacccgaagatcatcgacggctcgcgt
cgcgcccgcatcgccaagggctcgggcaccaaggtcaacgacgtcaaccagctcgtcgac
cgcttcttcgaggcccgcaagatgatgcagcagatggccaagggcggcatgcccggcatg
cccggaatgcctggccttcccggggcgggtggcggcaagaagggccgtcaggctcccaag
aagggcaagagcaagcgcgtctccggcaaccccgccaaggctgcgcagcagaagaaggct
ctcaccgagaagcccaaggcggcgaaccccttcggcggcgacgaggtcgactacgaggca
gcagccgccaacctgcagctgccgaaggacttctccaagttcctcaagtga

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