Nocardioides jishulii: FCL41_05755
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Entry
FCL41_05755 CDS
T06163
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noi03016
]
FCL41_05755 (truB)
Enzymes [BR:
noi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FCL41_05755 (truB)
Transfer RNA biogenesis [BR:
noi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCL41_05755 (truB)
Prokaryotic type
FCL41_05755 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
QCX27086
LinkDB
All DBs
Position
1221801..1222679
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AA seq
292 aa
AA seq
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MSSSSPVSGLVVVDKPGGITSHGVVSRVRRLAGTRKVGHAGTLDPMATGVLVLGTNRATR
LLGHLMLTRKAYDATIVLGVSTTTDDAEGEVTATRSAAHVDEAQVREALKAFVGDIEQVP
TAVSAIKVDGKRAYARVRDGEEVVLKARPVTIDSIDVHRVETVGETVEVDVSVRCSSGTY
IRAIARDLGAALDVGGHLGALRRTAVGGFDLARARTLEQLEESFEVVPLEDAARATFPTL
DLDAEQAADVRFGRRLSVEVEAITAVFSPEGEFLALYEPAGAVAKPLAVFVQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgtccccggtctccgggctcgtcgtcgtcgacaagcccgggggcatcacc
tcccacggggtggtctcccgggtgcgccgtctggcgggtacccgcaaggtcggccacgcc
ggcacgctcgacccgatggccaccggcgtcctcgtcctggggaccaaccgggccacgcgc
ctgctggggcacctgatgctcacgcgcaaggcgtacgacgccaccatcgtgctcggggtc
tccacgaccactgacgacgccgagggagaagtcaccgcgacccggtcggcggcccacgtc
gacgaggcccaggtgcgcgaggcgctgaaggccttcgtcggtgacatcgagcaggtgccc
acggccgtctcggccatcaaggtcgacggcaagagggcctacgcgcgggtccgcgacggt
gaggaggtcgtgctcaaggcgcgccccgtcaccatcgactccatcgacgtgcaccgcgtg
gagaccgtcggcgagacggtcgaggtcgacgtctcggtccgctgctccagcgggacctac
atccgtgccatcgcccgggacctcggcgccgccctggacgtcgggggacacctgggcgcc
ctgcgtcgcaccgcggtgggtggctttgacctcgcccgcgcgcggacgttggagcagctc
gaggagtcgttcgaggtggtcccgttggaggacgccgcccgggccaccttccccacgctc
gacctggacgccgagcaggccgccgacgtgcggttcggtcgccgcctctcggtcgaggtg
gaggcgatcacggccgtcttctcacccgagggcgagttcctggctctctacgagcccgcc
ggcgcggtggccaagccgctcgccgtcttcgtccagtga
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