Nocardioides jishulii: FCL41_06515
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Entry
FCL41_06515 CDS
T06163
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
noi
Nocardioides jishulii
Pathway
noi03030
DNA replication
noi03410
Base excision repair
noi03420
Nucleotide excision repair
noi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCL41_06515 (polA)
03410 Base excision repair
FCL41_06515 (polA)
03420 Nucleotide excision repair
FCL41_06515 (polA)
03440 Homologous recombination
FCL41_06515 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noi03032
]
FCL41_06515 (polA)
03400 DNA repair and recombination proteins [BR:
noi03400
]
FCL41_06515 (polA)
Enzymes [BR:
noi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCL41_06515 (polA)
DNA replication proteins [BR:
noi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FCL41_06515 (polA)
DNA repair and recombination proteins [BR:
noi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FCL41_06515 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCL41_06515 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
QCX27216
LinkDB
All DBs
Position
1383380..1386091
Genome browser
AA seq
903 aa
AA seq
DB search
MGTSVAADKVSVVTETSSSRPRLLLLDGHSLAYRAFFALPEENFSTSTGQPTNAVYGFTS
MLINVLRDEEPTHVAVAFDLSRQTFRLEEYSEYKAKRNKTPDGFKSQVPLIQEVLDALHI
PHLSMAGYEADDIIATLSTQAVAAGMDVLILTGDRDSLQLVGEHATVLYPMRGVSELARM
TPEAVEAKYGVPPHRYPELAALVGEDSDNLPGVPGVGPKTAAKWITTYDGLDNVIAQADA
IKGKAGDNLRAHLGDVIRNRRLNALVCDLALDLFPEDLVRRPWDRQEVHTLFDGLEFRVL
RDRLFDSLTSVEETDDSGFDVTGRTLAPGEVAAFLDEHAGDTMGLHVRGTWGAGTGRIEG
LAMAAGSSHAAYVDVETLSPEDDAALAAWLADPARGKVLHDAKGPMLALAAHGWELQGLT
SDTALAAYLVRPDQRSYDLADLTVRYLRRELKEESDSGQGALFDEDDAVADNAMLRARAV
LDLAEALAETVEEHGGTALLAEVELPLVHILARMEQTGIGVDLDHLTGLEQEFAAEVRRA
ADEAYAVIGKEINLGSPKQLQVVLFDELGMPKTKKTKTGWTTDADALQQLFEKTEHPFLL
HLLRHRDVTRLRQTVEGLLKTVAPDGRIHTTFNQIIAATGRLSSTDPNLQNIPVRTQEGR
RIREAFVVGEGYESLMTADYSQIEMRIMAHVSQDELLIEAFRSGRDFHSTTASRVFGVAP
DEVTSEMRAKIKAMNYGLAYGLSAFGLSQQLKIEPSEARVLMEDYFETFGGVRDYLQGTV
DEARRTGFTETLMGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLVKVAMRGVDRA
LTESGSASRMLLQVHDELVLEVAPGEAETLEALVREQMGAAADLLVPLDVSVGTGHSWHE
AAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
gtgggcacgtcggtggctgcggataaggtctctgtcgtgactgagacgtcctcctcccgc
ccccgcctcctgctgctggacggccactcgttggcctaccgggccttcttcgccctcccc
gaggagaacttctccacgagcacggggcagccgaccaacgcggtctacggcttcacctcg
atgctcatcaacgtgctgcgggacgaggagccgacccacgtcgcggtggccttcgacctg
tcgcggcagaccttccgcctcgaggagtactcggagtacaaggcgaagcggaacaagacc
cccgacggcttcaagtcgcaggtcccgctgatccaggaggtgctcgacgcgctccacatc
ccccacctctccatggcgggctacgaggccgacgacatcatcgcgaccctctccacccag
gccgtggcggccgggatggacgtcctgatcctcaccggtgaccgtgactccctgcagctg
gtgggcgagcacgcgaccgtgctctacccgatgcgtggcgtctcggagctggcgcgcatg
acgccggaggccgtggaggcgaagtacggcgtccctccgcaccgctaccccgagctcgcg
gcgctggtgggcgaggactccgacaacctgcccggcgtgcccggggtggggccgaagacg
gccgcgaagtggatcaccacctacgacggcctggacaacgtgatcgcgcaggccgacgcg
atcaagggcaaggccggcgacaaccttcgcgcccacctcggcgacgtcatccggaaccgc
cggctcaacgcgctggtgtgcgaccttgcgctcgacctcttccccgaggacctggtccga
cgtccgtgggaccgccaggaggtgcacacgctcttcgacggcctggagttccgggtcctg
cgcgaccgtctcttcgactcgctgacctccgtcgaggagaccgacgactccggcttcgac
gtcaccggacgcaccctcgcgcccggggaggtcgccgccttcctcgacgagcacgccggc
gacaccatgggccttcacgtccgcggcacgtggggcgccggcaccggcaggatcgagggc
ctggcgatggccgccgggtcgagccacgcggcgtacgtcgacgtggagaccctgagcccg
gaggacgacgccgcgctggcggcctggttggccgacccggcccgaggcaaggtgctccac
gacgccaagggaccgatgctggcgctcgccgcccacgggtgggagctgcaggggctgacg
agcgacaccgccctggcggcctacctcgtccgcccggaccagcgctcctacgacctggcc
gacctcaccgtgcgctacctgcgtcgcgagctgaaggaggagagcgactccggccagggg
gcgctcttcgacgaggacgacgcggtcgccgacaacgcgatgctgcgggcccgtgcggtg
ctggacctcgccgaggcgctcgccgagacggtcgaggagcacggtggcaccgcgctcctg
gcggaggtcgagctcccgctcgtccacatcctcgcccggatggagcagaccgggatcggg
gtcgacctcgaccacctcaccggcctggagcaggagttcgccgcggaggtgcgcagggcc
gccgacgaggcgtacgccgtgatcggcaaggagatcaacctcggttcccccaagcagctc
caggtcgtgctcttcgacgagctgggcatgcccaagaccaagaagaccaagaccgggtgg
accaccgacgctgacgccctccagcagctcttcgagaagaccgagcacccgttcctgctg
cacctgctgcgccaccgcgacgtcacccgcctgcgccagaccgtcgagggactgctcaag
accgtggctcccgacggccgcatccacacgacgttcaaccagatcatcgcggccaccggc
cgtctctccagcaccgacccgaacctccagaacatcccggtccggacccaggaggggcgt
cgcatccgtgaggcgttcgtcgtgggcgagggctacgagtcgttgatgaccgcggactac
tcccagatcgagatgcgcatcatggcgcacgtctcccaggacgagctcctcatcgaggcg
ttccgctccggccgcgacttccactcgaccaccgcctcgcgcgtcttcggggtcgccccc
gacgaggtgacgtcggagatgcgggccaagatcaaggcgatgaactacggcctcgcctac
ggcctctcggcgttcggcctctcccagcagctcaagatcgagccgtccgaggctcgggtg
ctgatggaggactacttcgagacgttcgggggagtgcgtgactacctccagggcacggtc
gacgaggcgcggcgcaccgggttcaccgagaccctgatggggcgtcgccgctacctgccc
gacctgaccagcgacaaccggcagcgtcgcgagatggccgagcggatggcgctcaacgcc
ccgatccaggggtcggcggccgacctcgtcaaggtggccatgcgcggggtcgaccgggca
ctgaccgagtcgggctcggcgtcgcggatgctgctccaggtccatgacgagctcgtcctc
gaggtcgctccgggcgaggcggagacgctcgaggccctcgtccgcgagcagatgggcgcc
gcggccgacctgctggtcccgctcgacgtctccgtgggcaccggccacagctggcacgag
gccgcgcactga
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