KEGG   Nocardioides jishulii: FCL41_06650
Entry
FCL41_06650       CDS       T06163                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
noi  Nocardioides jishulii
Pathway
noi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:noi00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FCL41_06650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:noi03021]
    FCL41_06650
Transcription machinery [BR:noi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FCL41_06650
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2
Other DBs
NCBI-ProteinID: QCX29152
LinkDB
Position
1418461..1419945
AA seq 494 aa
MLPAEVLTHPAIVLLVEAGSIDGTVTPDQVRQASDAAAVEPRHLKALLTHLSGVGITVDV
SAAPVARAAAAESGRRATTAKAAKKAPAAKADGAEAPAKKATAKKATAKKATAKKAAAKG
AVDVVEVNATDAAEVVVLGPDGKKILPDIPDEQFEKDVVADPTIKEDEKEASFVVSAADD
TDEPEQQVMVAGATADPVKDYLKQIGKVPLLNAEMEVELAKRIEAGLFSEEKLAKGGKLS
PKTLEELEWIVEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEK
FDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREP
TPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVSFT
LLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKL
RHPSRSQVLRDYLD
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgctccccgccgaggtgctcacgcaccctgcaatcgtcctcctggtggaggccggttcc
atcgatggcaccgtgacccccgaccaggtccggcaggccagtgacgctgccgcggtcgag
ccccggcacctcaaggcgctgctgacccacctcagtggcgtcggcatcaccgtcgacgtg
agcgccgctcctgtggcgcgcgccgcggctgcggagagtggccgccgcgccacgaccgcc
aaggctgccaagaaggcgccggccgcgaaggccgacggcgccgaggcgccggccaagaag
gcgacggcgaagaaggccaccgccaagaaggccaccgcgaagaaggcggccgccaagggc
gccgtcgacgtcgtcgaggtcaacgcgaccgatgcggccgaggtggtcgttctcggtccc
gacggcaagaagatcctgccggacatcccggacgagcagttcgagaaggacgtcgtggcc
gaccccacgatcaaggaggacgagaaggaagcatccttcgtcgtctccgcggccgacgac
accgacgagcccgagcagcaggtcatggtcgccggcgccaccgccgacccggtcaaggac
tacctcaagcagatcggcaaggtgccgctcctcaacgccgagatggaggtcgagctcgcc
aagcgcatcgaggccgggctcttctccgaggagaagctcgccaagggcggcaagctcagc
ccgaagacactcgaggagctcgagtggatcgtcgaggacggtcgccgcgccaagaaccac
ctgctcgaggccaacctgcgactcgtcgtctcgctggccaagcgctacaccggtcgcggc
atgctcttcctcgacctgatccaggaaggcaacctgggcctgatccgtgcggtcgagaag
ttcgactacaccaagggctacaagttctcgacctacgcgacgtggtggatccgtcaggcc
atcacccgcgcgatggccgaccaggcgcgcacgatccgcatccccgtgcacatggtcgag
gtcatcaacaagctcgcccgcgtgcagcgccagatgctccaggacctgggccgcgagccc
accccggaggagctggccaaggagctcgacatgaccccggagaaggtcatcgaggtccag
aagtacggccgcgagcccatctccctccacacgccgctgggcgaggacggagactccgag
ttcggtgacctcatcgaggactccgaggccatcgtccccgcggacgccgtctcgttcacc
ctcctgcaggagcagctccacgccgtgctcgacacgctctccgagcgtgaggcgggcgtg
gtctccatgcgcttcggcctcaccgacggtcagcccaagacgctcgacgagatcggcaag
gtctacggcgtgacgcgcgagcgcatccgtcagatcgagtccaagacgatgtcgaagctg
cgtcacccgagccgctcgcaggtcctgcgcgactacctcgactga

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