Nocardioides jishulii: FCL41_06650
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Entry
FCL41_06650 CDS
T06163
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
noi
Nocardioides jishulii
Pathway
noi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FCL41_06650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noi03021
]
FCL41_06650
Transcription machinery [BR:
noi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FCL41_06650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
QCX29152
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Position
1418461..1419945
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AA seq
494 aa
AA seq
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MLPAEVLTHPAIVLLVEAGSIDGTVTPDQVRQASDAAAVEPRHLKALLTHLSGVGITVDV
SAAPVARAAAAESGRRATTAKAAKKAPAAKADGAEAPAKKATAKKATAKKATAKKAAAKG
AVDVVEVNATDAAEVVVLGPDGKKILPDIPDEQFEKDVVADPTIKEDEKEASFVVSAADD
TDEPEQQVMVAGATADPVKDYLKQIGKVPLLNAEMEVELAKRIEAGLFSEEKLAKGGKLS
PKTLEELEWIVEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEK
FDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREP
TPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVSFT
LLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKL
RHPSRSQVLRDYLD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgccgaggtgctcacgcaccctgcaatcgtcctcctggtggaggccggttcc
atcgatggcaccgtgacccccgaccaggtccggcaggccagtgacgctgccgcggtcgag
ccccggcacctcaaggcgctgctgacccacctcagtggcgtcggcatcaccgtcgacgtg
agcgccgctcctgtggcgcgcgccgcggctgcggagagtggccgccgcgccacgaccgcc
aaggctgccaagaaggcgccggccgcgaaggccgacggcgccgaggcgccggccaagaag
gcgacggcgaagaaggccaccgccaagaaggccaccgcgaagaaggcggccgccaagggc
gccgtcgacgtcgtcgaggtcaacgcgaccgatgcggccgaggtggtcgttctcggtccc
gacggcaagaagatcctgccggacatcccggacgagcagttcgagaaggacgtcgtggcc
gaccccacgatcaaggaggacgagaaggaagcatccttcgtcgtctccgcggccgacgac
accgacgagcccgagcagcaggtcatggtcgccggcgccaccgccgacccggtcaaggac
tacctcaagcagatcggcaaggtgccgctcctcaacgccgagatggaggtcgagctcgcc
aagcgcatcgaggccgggctcttctccgaggagaagctcgccaagggcggcaagctcagc
ccgaagacactcgaggagctcgagtggatcgtcgaggacggtcgccgcgccaagaaccac
ctgctcgaggccaacctgcgactcgtcgtctcgctggccaagcgctacaccggtcgcggc
atgctcttcctcgacctgatccaggaaggcaacctgggcctgatccgtgcggtcgagaag
ttcgactacaccaagggctacaagttctcgacctacgcgacgtggtggatccgtcaggcc
atcacccgcgcgatggccgaccaggcgcgcacgatccgcatccccgtgcacatggtcgag
gtcatcaacaagctcgcccgcgtgcagcgccagatgctccaggacctgggccgcgagccc
accccggaggagctggccaaggagctcgacatgaccccggagaaggtcatcgaggtccag
aagtacggccgcgagcccatctccctccacacgccgctgggcgaggacggagactccgag
ttcggtgacctcatcgaggactccgaggccatcgtccccgcggacgccgtctcgttcacc
ctcctgcaggagcagctccacgccgtgctcgacacgctctccgagcgtgaggcgggcgtg
gtctccatgcgcttcggcctcaccgacggtcagcccaagacgctcgacgagatcggcaag
gtctacggcgtgacgcgcgagcgcatccgtcagatcgagtccaagacgatgtcgaagctg
cgtcacccgagccgctcgcaggtcctgcgcgactacctcgactga
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