Nocardioides jishulii: FCL41_07625
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Entry
FCL41_07625 CDS
T06163
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noi03400
]
FCL41_07625
DNA repair and recombination proteins [BR:
noi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FCL41_07625
Archaeal homologous recombinant proteins
FCL41_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QCX27405
LinkDB
All DBs
Position
1624854..1627742
Genome browser
AA seq
962 aa
AA seq
DB search
MRIHSIEMAGFGPFLVPQRVDFDAFADDGIFLIQGRTGAGKSSILDGVVYALYNSAPRYR
SGAATQLRSHHCSADDATWVQLEFSTDDCRYRVRRSPEYERPRSRGEGTTTERPTAHLWR
LDGGEWIALEAGVRPVAQALDEILPLSCQQFLQVVLLAQGEFARFLVADSAERKALLGAL
FDTKRFETLDHLLQERVSRRRAEMERAASANATLVEALALHLRVDAPAEPDEEWLAGLHD
MTAAEAAEAEATRVAARRQMEEVRTEWERLRAVLTLQERRDSLRRTLEQLEEERESVARL
REVCDRAVAAQNVRPALEARARHATRLREARVELTKAEASYEELCGATVPDDLPGVRDAL
VGEVDAARRALEAEARLAATRSQVAEAERELVGRRAEVEAIDTELGALRQVLEREVTTSV
EKASAAVHELVDELTRARRHATATEASALAEQRLIEAGESRTRASAALDELRRLSFHQYA
GRLAETLVEGEACPVCGGVEHPSPAPRSGAPVQDEDVEQAERAFDEAQQAYEGAKAARAA
ARATEEAYAGARTVEVLSDRVEEATGVLRQAERDERERRDAADAVTNLSERRQQCAEAAA
GLVVRVQALGETIDDLVQRVESARSGSDSVADRLDGLRAHLTALDAVTASRHDEARAYAD
HLAATEHLGEAVEQHGFTDEQECLAAARPAEEIERLVRRVRRHDEAWTVTTTGLADEALA
ALPDVLVDPAPLEARVREAAADHDAAAAAAGVAAQRHETTADLVRRVRTAWSRGAAERRE
FEVLRRLAASVHGEQPNTRRLRLESYVLAVELEQIVLAANRRLQVMSDGRYALLLDDRVA
TRGNNSGLGVRVLDHHTQEPRTPESLSGGEKFLASLSLALGLSEVVTNRAGGVSLDTLFI
DEGFGSLDGETLDLAMHTLDSLREHGRTVGVISHVEVMRERIPAQLHVEHAPGGWSTIRA
LA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccacagcatcgagatggccgggttcggccccttcctggtgccgcagcgggtg
gacttcgacgcctttgccgacgacgggatcttcctcatccagggcaggaccggcgccggc
aagtcgagcatcctggacggtgtcgtctacgccctctacaacagcgccccgcgctaccgt
tccggtgccgcgacccagctccgcagccaccactgctcggccgacgacgccacgtgggtc
cagctggagttcagcaccgacgactgccgctaccgcgtccgtcgctccccggagtacgaa
cgtccccgcagccgcggtgagggcaccacgaccgagcggccgacggcgcacctgtggcgc
ctggacggcggcgagtggatcgcactggaggcgggcgtacgccccgtggcccaggcgttg
gacgagatcctgccgctctcctgccagcagttcctgcaggtcgtcctgctcgcccagggt
gagttcgctcgtttcctggtagccgacagtgctgaacgcaaggcgctcctgggcgcgctc
ttcgacaccaagcggttcgagaccctcgaccacctcctgcaggagcgtgtgtcgcgtcgc
cgggccgagatggagcgtgccgcctcggcgaacgccacgctcgtggaggcactcgccctc
cacctgcgggtcgacgcccctgctgagccggacgaggagtggctggccggcctccacgac
atgaccgccgcggaggcggccgaggccgaggccacccgcgtcgcagcccggcggcagatg
gaggaggtccgcaccgagtgggagcggctgcgcgccgtgctgacgctccaggagcgtcgg
gactcgctccggcgcaccctcgagcagctggaggaggagcgggagtcggtcgcacgtttg
cgcgaggtgtgtgaccgggccgttgcggcccagaacgtgcgccctgccctggaggcgcgc
gcgcgtcacgccacgcgtctgcgcgaggcacgggtggagctgaccaaggccgaagccagc
tacgaggagctctgtggggccaccgtccccgacgacctgccgggggtgagggatgcattg
gtcggggaggtcgacgcggcccgccgtgccctcgaggcggaggcgcgtctggccgccacg
cggtcgcaggtggccgaggccgagcgtgagctggtcggacggcgggcggaggtcgaggcg
atcgacaccgagctgggcgcgctgcgtcaggtgctcgagcgtgaggtcacgaccagcgtc
gagaaggccagcgccgcggtgcacgagctcgtcgacgagctcacccgtgctcgtcgccac
gccacggccacggaggccagtgctctggccgagcagcggctgatcgaggccggcgagtcg
cggacccgagcctcagcggccctggacgagcttcgtcggttgagcttccatcagtacgcc
gggcggctggccgagaccttggtggagggtgaggcgtgcccggtgtgcggaggcgtggag
cacccctcacccgctccgcggtcgggcgcgccggtgcaggacgaggacgtcgagcaggcg
gagcgcgccttcgacgaggcacagcaggcctacgagggggcgaaggccgcccgcgcggct
gctcgggcgaccgaggaggcctacgcaggcgcccgcacggtcgaggtcctgtcggatcga
gtcgaggaagccaccggcgtcctgcgtcaggcggagcgcgacgagcgcgagcgtcgtgat
gccgccgatgcagtgacgaacctgtccgagcgacgccagcagtgcgccgaagccgccgca
ggcctggtcgtgcgcgtgcaggcgctgggcgagacgatcgacgacctcgtccagcgggtc
gagtccgcgcgctccggttctgactccgtggctgatcgcctcgatggccttcgggcacat
ctcacggcgctggacgcggtgacggcgtcgcgccacgacgaggcgcgggcgtacgccgac
cacctggccgccaccgagcacctcggcgaggcggtggagcagcacggcttcaccgacgag
caggagtgcctggctgcggctcgtcccgccgaggagatcgaacggctcgttcggcgcgtg
cgccgccacgacgaagcctggaccgtgacgacgaccgggctggccgacgaagccctggcc
gcgctgccggacgtcctcgtcgacccagctcccctcgaggctcgcgtgagggaggctgcg
gccgaccacgacgctgccgcagcggctgccggagtggcggcacagcgccacgagaccact
gctgacctcgtccggcgggtgcggaccgcgtggtcgcgcggggcagccgagcggcgcgag
ttcgaggtcctgcgccgtcttgccgcctccgtccacggggagcagcccaacacccgtcgg
ctgcgactcgagagctacgtcctggcggtggagctggaacagatcgtgctggcggcgaac
cgcaggctccaggtgatgtccgacggccgctacgccctgctgctcgacgaccgggtcgcc
acccgcggcaacaactccgggctcggtgtcagggtgctggaccaccatacccaggaaccg
cgtacgccggagtcactgtcgggcggcgagaagttcctggcctcgctctccctggcactg
ggcttgtcggaggtggtcaccaaccgagccggaggggtcagcctcgacaccctcttcatc
gacgaagggttcgggtcgctcgacggggagaccctcgacctggccatgcacacgctcgac
tcgttgcgcgagcacggccggaccgtcggggtgatcagccacgtggaggtgatgagggaa
cggatcccggcgcagctgcacgtggagcacgccccgggagggtggagcacgatccgcgcg
ctggcctga
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