Nocardioides jishulii: FCL41_08465
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Entry
FCL41_08465 CDS
T06163
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
noi03051
]
FCL41_08465 (pafA)
Enzymes [BR:
noi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
FCL41_08465 (pafA)
Proteasome [BR:
noi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
FCL41_08465 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QCX27551
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All DBs
Position
1798439..1799800
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AA seq
453 aa
AA seq
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MDRRIMGIENEYGVTCTFEGQRRLSPDEVARYLFRKVVAWGRSSNVFLANGARLYLDVGS
HPEYATPECDSVEDLVAHDKAGERILEELMLDAQARLEDEGIKGDIYLFKNNTDSGGNSY
GCHENYLIGRQGEFSAVADVLIPFLVSRQIIVGAGKVVQTPRGATYAVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTMLKVASCELVLRMIEDGVVM
RDLTLENPIRAIREMSYDMTGRRTVRLANGREASAVDIQAEYLGRALDYVDRRGVRTPTI
DRVLDLWERALKAIDSDDLSMVEREIDWVIKYRLIERYRAAHDLPLGHPRIAQLDLAYHD
IRRDRGLFHLLQQRGAVARVTDDATVEAAMNVPPQTTRAKLRGDFIRRAQEQHRDFTVDW
VHLKLNDQAQRTVLCKDPFRAEDERVERLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaggatcatgggcatcgagaacgagtacggagtcacgtgcacgttcgagggc
cagcgccgtctgagtcctgacgaggtggctcgctacctcttccgcaaggtcgtggcctgg
ggacgcagcagcaacgtcttcctcgccaacggtgcccgcctctacctcgacgtcgggagc
cacccggagtacgccacacccgagtgcgactccgtggaggacctcgtcgcccacgacaag
gcgggggagcggatcctcgaggagctgatgctcgacgcccaggcccgcctggaggacgag
ggcatcaagggcgacatctacctgttcaagaacaacaccgactcgggcggaaactcctac
ggctgccacgagaactacctcatcggccgccagggggagttctcggccgtggccgacgtg
ctgatccccttcctggtctctcgccagatcatcgtcggtgccggcaaggtcgtgcagacg
ccgcgtggcgccacgtacgcggtctcccagcgtgccgagcacatctgggagggcgtgtcg
agcgcgacgacccgcagtcgtccgatcatcaacacccgcgacgagccgcacgcggacgcc
gagcgctaccggcgcctgcacgtcatcgtcggcgactccaacatgagcgagaccaccacg
atgctcaaggtcgcgagctgcgagctggtgctgcggatgatcgaggacggggtggtcatg
cgcgacctcaccctcgagaaccccatccgggcgatccgcgagatgtcgtacgacatgacc
gggcgccgcaccgtgcggctggccaacggacgcgaggcgagcgccgtcgacatccaggcc
gagtacctcggccgggcgctggactacgtggaccgccgtggggtgcggacgccgacgatc
gaccgcgtgctggacctgtgggagcgcgccctcaaggccatcgactccgacgacctcagc
atggtggagcgcgagatcgactgggtgatcaagtaccgcctgatcgagcgctaccgcgcc
gctcacgacctcccgctgggccacccccgcatcgcccagctcgacctggcctaccacgac
atccgtcgtgaccgagggctcttccacctgctccagcagcgcggggccgtcgcccgcgtc
accgacgacgcgaccgtcgaggccgccatgaacgtcccgccccagacgacacgcgcgaag
ctgcgcggcgacttcatccgacgggcccaggagcagcaccgcgacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcgaaccgtcctgtgcaaggaccccttccgc
gcggaggacgagcgcgtcgagcgtctcatcgccggtatgtga
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