Nocardioides jishulii: FCL41_09725
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Entry
FCL41_09725 CDS
T06163
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
noi03009
]
FCL41_09725 (rimO)
Enzymes [BR:
noi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FCL41_09725 (rimO)
Ribosome biogenesis [BR:
noi03009
]
Prokaryotic type
ribosomal protein modification factors
FCL41_09725 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QCX27767
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All DBs
Position
complement(2059849..2061333)
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AA seq
494 aa
AA seq
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MDTRTPPQQNGPISVAVVTLGCARNEVDSEELAGRLEADGFRLVEDPEDADTVVVNTCGF
VESAKKDSVDTLLQASDLKEHGRTQAVVAVGCMAERYGKELADSLPEADAVLGFDDYPDI
AARLRSIIGGEKHEPHVPSDRRALLPISPVDRDASTISVPGHGAAPEIQAPDLNASESPA
SGPRAMRRRLDGGPMAPLKLASGCDRRCSFCAIPSFRGSFVSRRPSDVLHEAQWLATQGV
KELFLVSENSTSYGKDLGDLRLLETLLPELTAIDGIEWVRVSYMQPAETRPGLVQAVAHT
PGVVPYFDLSFQHASASVLRRMRRFGDPQSFLTLLDQVRAEAPSAGIRSNVIVGFPGETE
EDLETLCDFLEAARLDVTGVFGYSDEDGTEAATYDGKLDPDEVAARVAHVNALVEELTTQ
RAEERIGERVQVLVESLEDGLVEGRAQHQGPEVDGTTQLVGAAADVRIGDLVWAEVVESQ
GVDLVAQAQNGESR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcgtactcccccccagcagaacgggccgatcagcgtcgcagtggtgacgctc
ggatgtgctcgcaacgaggtcgactccgaagagctggccgggcgtctcgaggccgacggc
ttccgcctcgtcgaggaccccgaggacgccgacaccgtcgtggtcaacacgtgcggcttc
gtcgagtccgcgaagaaggactcggtcgacacgctgctccaggccagtgacctcaaggag
cacgggcgtacgcaggccgtcgtcgccgtcgggtgcatggccgagcgctacggcaaggag
ctcgccgactcgttgcccgaggccgacgccgtgctgggcttcgacgactatcccgacatc
gccgcacgcctgcgctcgatcatcggcggcgagaagcacgagccgcacgtcccgtccgac
cgccgggcgctgctgcccatctcgccggtcgaccgcgacgccagcaccatcagcgtcccc
ggccacggtgcagctccggagatccaggcccctgacctcaacgcctcggagtcgcccgcc
agcggcccccgcgccatgcgccggcgtctcgacggcggccccatggctccgctcaagctc
gcgagcgggtgcgaccgccgctgctccttctgcgccatccccagcttccgtggctccttc
gtctcgcgccgtcccagcgacgtgctgcacgaggcgcagtggctcgcgacccagggggtc
aaggagctcttcctcgtcagcgagaactccacctcgtacggcaaggacctgggcgacctg
cgcctgctcgagaccctgctgcccgagctcaccgccatcgacggcatcgagtgggtgcgt
gtctcctacatgcagcccgccgagacccggcccgggctggtgcaggccgtggcgcacacc
cccggcgtcgtgccctacttcgatctctccttccagcacgccagcgcctcggtgctgcgg
cggatgcgtcgcttcggcgacccgcagagcttcctgaccctgctcgaccaggtgcgcgcc
gaggcgccgtcggccggcatccgctccaacgtcatcgtcggcttcccgggtgagaccgag
gaggacctggagacgctctgcgacttcctggaggccgcccgcctcgacgtgaccggtgtc
ttcggctactccgacgaggacggcacggaggccgccacgtacgacggcaaactggacccc
gacgaggtcgccgcccgcgtcgcccacgtcaacgcgctggtcgaggagctgaccacgcag
cgtgccgaggagcggatcggagagcgggtccaggtgctcgtggagagtctggaggacgga
ctcgtcgagggtcgtgcccagcaccagggcccggaggtcgacggcaccacccagctcgtg
ggtgccgcggccgacgtccgcatcggtgacctggtgtgggccgaagtcgtggagagccag
ggcgtcgacctggtggcgcaggcgcagaacggagagagtcgatga
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